Protein

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Genbank accession
YP_004421853.1 [GenBank]
Protein name
ribonuclease III
RBP type
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MTTPNFSIIELAASQAQKYVTVNEALRVVDTAMNLTVIRADNTAPPGSPSEGDKYIPFATATGAWAGQEDNIACFINAEWIFFTPAEGWRCYNQTTNELLIFDGSSWSPSVPSFGNGSAASPAYSFPTDSDTGMYRNAANELGFATGGSERLKLTNTQITSSTGDFLLNNAGSNSQATLNKNAAGDNAILNFQTGFSHHASVGLQGNNDFTVKVGTGFSIAQVIQNDLSATDFYTPELNVNEANGGALRLRVIEEELTGLSGATATTTASFPNQSIILGVSLRVTTTITGATNFDCGDGTTAGRFGGSLGLAAGTTNQGTIGPSGNYGTTNVVLTANGSNFTAGAVRVCLIYLELIAPTS
Physico‐chemical
properties
protein length:360 AA
molecular weight: 37433,77220 Da
isoelectric point:4,42050
aromaticity:0,08611
hydropathy:-0,07444

Domains

Domains [InterPro]
DC_0438
STR
1–360
DC_0438
IPR021251
STR
22–107
IPR021251
YP_004421853.1
1 360
Architecture
STR
STR 1-360
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage RDJL Phi 1
[NCBI] 		562742 Uroviricota > Caudoviricetes > Xiamenvirus >
Host Roseobacter denitrificans
[NCBI] 		2434 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales
Host Roseobacter denitrificans OCh 114
[NCBI] 		375451 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Roseobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004421853.1 [NCBI]
Genbank nucleotide accession
NC_015466 [NCBI]
CDS location
range 61070 -> 62152
strand +
CDS
ATGACGACCCCAAATTTCTCCATCATTGAGCTGGCAGCGTCCCAGGCTCAAAAGTATGTGACGGTCAATGAGGCTCTCCGCGTGGTCGATACGGCCATGAACCTCACAGTGATCCGCGCCGATAACACTGCACCTCCGGGGTCTCCTTCGGAGGGTGACAAGTATATCCCTTTTGCCACTGCCACTGGAGCCTGGGCCGGACAAGAGGACAATATCGCCTGCTTCATCAACGCTGAGTGGATTTTCTTCACGCCGGCCGAAGGATGGAGGTGCTACAACCAGACCACCAACGAGCTCCTGATTTTTGATGGGTCCTCCTGGTCTCCGTCCGTCCCGAGCTTTGGCAACGGTTCTGCAGCCTCCCCTGCCTATTCGTTTCCTACGGATAGCGATACGGGTATGTATCGGAATGCTGCCAACGAACTTGGGTTTGCGACTGGAGGCTCTGAGCGCCTGAAGCTGACCAATACTCAAATCACGTCGTCGACTGGGGACTTCCTGCTAAACAACGCCGGCTCGAACAGCCAGGCCACTCTCAACAAAAACGCGGCTGGGGACAATGCTATCCTAAACTTCCAGACGGGCTTTTCGCATCATGCGTCCGTCGGTCTGCAGGGCAACAATGACTTCACGGTCAAGGTCGGGACGGGCTTCAGCATAGCTCAAGTGATCCAGAACGATCTTTCGGCGACCGACTTCTATACGCCTGAGCTGAACGTCAACGAGGCGAATGGGGGTGCTCTACGGCTTCGTGTGATCGAAGAGGAGCTGACCGGTCTGTCTGGTGCAACCGCCACGACGACGGCTTCGTTCCCCAACCAGAGCATCATCCTCGGCGTCTCGCTGCGGGTGACCACGACGATCACAGGGGCGACTAACTTCGATTGCGGAGACGGAACTACTGCTGGCCGATTTGGAGGCTCTCTGGGTCTCGCAGCTGGAACCACGAACCAGGGGACTATTGGACCGTCGGGCAACTATGGCACGACCAACGTTGTGCTCACTGCCAACGGATCGAATTTCACGGCTGGCGCGGTTCGTGTCTGCCTGATCTACCTGGAGCTGATTGCTCCGACGAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
48b9fd835576d5e4294806a13f143e6490f1b19606602e34358deb899e3e6e9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50