Protein

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Genbank accession
YP_008242174.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MNYTVDIIDTENDDHVISYEYAAKSSIVLSWNGGDSKDDQFIVGSTLAFTLEVHVSKMQDGKFRHLFTGNENKYNVIMYKTDDPGVIVWSGFLLPDSYSEPYTNGTIYPGFEATDGLGRLKGRILPDDFYTKENSVVSYIANILKLTGLELPINIAPAIENKLVKRYDLIYLSGLDFVNDEGAKDKAYDILKDILESMLCVCYQCDNEWYIDGLNQRHLKQVVYYNYDFDGNYLDYTKKNRLLKNFDGEDNVNISVIAPYKDVTVSHEKIEPTLPSEISEEKNEGWAVGDGVEAAIFPTYWFGNGLFLPISNGPNYKVQLLTNAVANELNFTQYISLLKKIPVNQFDKFVMKAVFTSDVSAAQSATNWTFNINCIQVLVNNVVIHQITGSFEEKEIEINLDIYVKDHGLLDIRIIQPIFKGNFQDGTRAEFITLDSLELTPVGFNEVEVFNEIISEGYTTFKEVELKIADDSTGFSQAFRLGKLDEKNEAIFNAIEIPVLDSFSQFGKFYSVVSLYGANLIKDNIDDVFHSSLVEVGNDGRLYDLDVIYNYRNGEQMVVETPTPITSGYFEVRRYKIKDVAADRSSWVEWSDSLYPIENDGYLEAVAKVYKRLFITPHERVDFTQIGAVKFNDLLNFNYIGSSNYFIVNCSWDVDRNSTNITMIKAVYQNEVIDDGGGDGGGGGAVNLPPLVNAGPDKEADISNPLGFPGVNILATAYDPDGFIASVKWEVVSGQVIFNSTDTLGIYVLLVSVEAVLMVTVTDSEGLTASDTVKIYKVIDYQLILNQYQYYNVDGLQLVGEARKSDTLLFSPALGADDSITVKGTYRLRVFEMNHPRGPYPGTVSFQIEKNGNLIVNVTKFGNVLDNSGNFEFNYIEGDVVRFNILCYAQFVAQSRTNYIRLRSEYEINNVSFSNSTASITGYPAGKSIEYKGVN
Physico‐chemical
properties
protein length:935 AA
molecular weight: 104921,56690 Da
isoelectric point:4,55033
aromaticity:0,12193
hydropathy:-0,16406

Domains

Domains [InterPro]
IPR013783
STR
684–776
IPR013783
IPR013783
STR
684–775
IPR013783
YP_008242174.1
1 935
Architecture
STR
STR 684-776 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008242174.1
1 935
Domain Start End Length (AA) Confidence
N-terminal 1 276 276 0,8502
Central domain 277 569 294 0,3757
C-terminal 570 935 365 0,2063
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-276
Central
277-569
C-terminal
570-935

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi39:1
[NCBI] 		1327993 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008242174.1 [NCBI]
Genbank nucleotide accession
NC_021804 [NCBI]
CDS location
range 13255 -> 16062
strand +
CDS
ATGAATTATACAGTAGATATAATAGATACAGAAAATGATGATCATGTAATTAGTTATGAATATGCAGCTAAATCATCTATTGTTTTATCTTGGAATGGTGGTGATTCTAAAGATGATCAATTTATAGTAGGTTCTACTTTAGCGTTTACACTTGAAGTCCATGTTTCAAAAATGCAGGATGGTAAATTCAGGCACTTGTTTACAGGTAATGAAAATAAGTATAATGTTATAATGTATAAAACAGATGATCCTGGTGTTATTGTTTGGTCGGGTTTTTTATTGCCAGATTCTTATAGTGAACCATACACAAACGGCACTATTTATCCAGGATTTGAAGCTACTGATGGTTTAGGTAGGTTAAAAGGTAGGATTTTGCCAGATGATTTTTATACTAAAGAAAATTCTGTAGTATCTTATATTGCAAATATTTTAAAATTAACGGGTTTAGAGCTGCCTATTAATATAGCGCCTGCTATAGAAAATAAATTAGTAAAAAGATATGATTTAATATATTTGTCTGGACTTGATTTTGTGAATGATGAAGGCGCTAAAGATAAAGCTTATGATATTTTAAAAGATATATTAGAATCAATGCTTTGTGTTTGTTATCAATGTGATAATGAATGGTATATAGACGGTTTAAATCAGCGGCATTTAAAACAGGTTGTTTATTATAACTATGATTTTGATGGTAATTATTTAGACTACACGAAAAAAAATAGACTTTTAAAAAATTTTGATGGTGAAGATAATGTAAATATATCTGTTATAGCTCCGTATAAAGATGTTACTGTATCACATGAAAAAATAGAACCTACATTACCTTCTGAAATATCAGAAGAAAAAAATGAAGGTTGGGCTGTAGGTGATGGTGTGGAAGCTGCTATTTTTCCTACTTATTGGTTTGGTAATGGTTTATTTTTACCTATTTCTAATGGTCCGAATTATAAGGTTCAACTATTGACTAATGCAGTAGCTAATGAGTTAAATTTTACGCAGTATATATCACTATTAAAAAAAATTCCTGTTAATCAGTTTGATAAATTTGTAATGAAAGCTGTTTTTACTTCTGATGTGTCGGCTGCTCAAAGTGCTACAAATTGGACTTTTAATATAAATTGTATTCAGGTTTTAGTAAACAATGTAGTGATACATCAAATTACAGGTAGTTTTGAAGAAAAAGAAATAGAAATAAATTTAGATATTTATGTAAAAGATCATGGATTATTAGATATTAGAATTATACAGCCAATATTTAAGGGTAATTTTCAGGATGGAACCCGAGCAGAATTTATTACTTTAGATTCTTTAGAATTAACGCCTGTAGGTTTTAATGAAGTAGAAGTTTTTAATGAAATTATAAGCGAAGGCTACACTACCTTTAAAGAAGTGGAATTAAAAATAGCAGATGATTCTACAGGTTTTTCACAGGCTTTTAGGCTTGGTAAATTGGATGAAAAAAATGAAGCTATATTTAATGCGATTGAAATACCTGTACTAGATTCTTTTTCACAGTTTGGAAAGTTCTATAGTGTTGTTTCTTTGTATGGTGCTAATCTTATTAAAGATAATATAGATGATGTTTTTCATTCGTCTTTAGTAGAAGTTGGTAATGATGGCCGTTTGTATGATTTAGATGTTATTTATAACTATAGGAATGGGGAGCAAATGGTAGTAGAAACACCTACACCTATTACTTCTGGTTACTTTGAGGTAAGGCGTTATAAAATTAAAGATGTAGCTGCAGATAGATCTTCATGGGTTGAGTGGTCTGATAGTCTGTATCCTATTGAGAATGATGGATATTTAGAAGCGGTTGCAAAGGTTTATAAAAGGCTATTTATTACGCCGCATGAAAGGGTAGATTTTACGCAGATCGGAGCGGTAAAATTTAATGATTTATTAAATTTTAATTATATAGGATCTTCTAATTATTTTATAGTTAATTGTTCTTGGGATGTAGACCGTAATAGTACAAATATTACAATGATTAAAGCGGTTTATCAAAATGAAGTTATAGATGATGGTGGTGGTGACGGCGGCGGCGGGGGTGCTGTGAATTTACCGCCTTTGGTTAATGCGGGGCCTGATAAAGAAGCAGATATTTCTAATCCTTTAGGTTTTCCAGGTGTTAATATTTTAGCTACGGCATATGATCCAGATGGTTTTATTGCTTCTGTTAAGTGGGAGGTAGTTAGTGGCCAGGTTATTTTTAATAGTACAGATACTTTAGGTATTTATGTATTATTAGTGAGTGTAGAAGCGGTTTTAATGGTAACGGTAACAGATAGTGAAGGTTTAACAGCGTCTGATACGGTTAAAATTTACAAAGTTATTGATTATCAATTAATACTAAATCAATATCAGTATTACAATGTTGACGGTTTGCAGTTGGTCGGGGAAGCTAGAAAAAGTGATACCTTATTATTTTCACCCGCTTTAGGTGCAGATGATTCTATAACGGTAAAGGGTACGTATAGGTTAAGAGTTTTTGAAATGAATCACCCACGGGGGCCATATCCTGGTACTGTGAGTTTTCAAATTGAAAAAAATGGGAACTTAATTGTAAATGTTACTAAATTTGGCAATGTTTTAGATAATTCTGGTAACTTTGAATTTAATTATATAGAAGGTGATGTAGTAAGATTTAATATTTTATGTTATGCGCAATTTGTTGCACAGTCTAGGACCAATTACATTAGACTACGTTCAGAATATGAAATTAATAATGTTTCTTTTTCTAATTCTACCGCTAGTATTACAGGTTACCCTGCAGGTAAATCTATTGAGTATAAAGGGGTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43e11c4a259da01aa51fc6ae5e39c8f4f3f0a2648d04f8e51a4957f2679d0cfd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50