Protein

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Genbank accession
AUR82493.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGINRYKSTCTSSAVLVNKYIGTAYDHVKNVSDNIEDVKTVADALGEDFPEDGLDTLVDNIDDVVTVANNLGVVTTVANISNEVVTVAGIEQEIIDVPSYTAQAIDAANAAEQDADRAEAEAARATTEADRATDAADTALEDFEATFRAQFVYKRIGNISDVVGQQLPESDKLNSYQYPDDSGEWYGPVQVQVFPITIPTDPSSDDGWALVNALTVDNAGLGKVTADGSTTPRTLSDRFSDVINVKDFGAVGDGVTDDTAAFKAALLFASPFDSFPIGTNFFNSGYYQTSGGTVYVPNGKYRLTENLYLNHGVSLIGQESTQTRWGSSTVQTWNQHGCANLYYDLPQDAEVICLDTVGFDNTTGLRSTNQGEILGSDIDSGKISLGKVVIRNITISMDEGKAIFCGLRVAGSPTSVIENVAVVGRPLIAIMQSASWAAKWKDIFTRSSGRGLHIRGANAGATFENCYISGFGFAGVGFPPERPIDHTKIFEGAIDDQGFSTGISSTDVGHINFKNVLTESWERSYIISNCYGLTVGDSYHENFTEIGFDIYSSTVAIESPRLSSTAPAGEPLNAVGLRVKDLTYPGGVVVTQTYQGPPVYSQDTGGYRVTKQFIEVVSGCADGSVIVTGGHRPVLGDVYNPAVILPQQSEEVVRFFVADADYTDPAGVNIVPTDAGLGYSHELPLKTIEEALSRCTRAGTYTIILARGGNYSLADLSVARNIANVNITITADTSTTGDNPIFGKPTDGNYRLLTFENSSVKCSSTVDVATGSNKGIFNAKGRSTFIFEGLIDFLTSTGALVNSDYSTADISVLISGTASLSGVGFIAGTRASANGERGVIGFSSDIDLGTIQSNPFNPLFWSIKFDGRTDSTGYRMYTGVPNIPPNYVGEELLDTINLNFYKAIGLSGTDWKLMT
Physico‐chemical
properties
protein length:915 AA
molecular weight: 97645,02300 Da
isoelectric point:4,44620
aromaticity:0,09180
hydropathy:-0,10907

Domains

Domains [InterPro]
DC_1322
ATT
65–262
DC_1322 DC_1090
Coil
Unmapped
101–135
Coil IPR012334
IPR011050
STR
240–544
IPR011050
IPR024535
ENZ
243–324
IPR024535
IPR012334
STR
244–568
IPR012334
AUR82493.1
1 915
Architecture
ATT
STR
RBD
ATT 65-262 | STR 263-570 | RBD 571-915
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR82493.1
1 915
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,9953
Central domain 259 866 609 0,9215
C-terminal 867 915 48 0,9570
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-258
Central
259-866
C-terminal
867-915

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.025.O._10N.222.46.B6
[NCBI] 		1881420 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82493.1 [NCBI]
Genbank nucleotide accession
MG592409 [NCBI]
CDS location
range 4937 -> 7684
strand +
CDS
ATGGGTATAAACAGATATAAGAGTACATGTACATCAAGTGCAGTCCTAGTGAATAAGTACATTGGTACTGCTTACGATCACGTAAAGAATGTGTCAGATAACATTGAAGATGTTAAGACAGTTGCAGATGCACTAGGCGAAGACTTTCCTGAGGACGGGTTAGACACCTTGGTGGATAATATTGATGACGTGGTAACGGTTGCTAATAACCTTGGTGTTGTTACTACTGTTGCAAATATTAGTAATGAAGTAGTCACTGTTGCAGGTATTGAACAAGAGATCATTGATGTACCTAGCTATACAGCTCAGGCTATTGATGCTGCTAATGCTGCAGAGCAGGATGCTGATAGGGCGGAAGCTGAAGCAGCTCGAGCAACAACTGAAGCGGACCGTGCTACCGATGCTGCGGATACAGCGTTAGAAGATTTTGAAGCTACCTTCCGAGCACAGTTTGTATATAAAAGAATTGGAAATATTTCAGATGTAGTTGGTCAGCAGCTCCCAGAGTCGGATAAGTTGAACTCTTACCAATACCCAGATGATTCCGGTGAGTGGTATGGTCCAGTTCAAGTTCAAGTTTTCCCGATTACAATCCCAACTGACCCTTCAAGTGATGATGGGTGGGCTTTGGTTAATGCACTGACGGTTGATAATGCTGGACTGGGCAAAGTCACTGCTGATGGTTCTACTACTCCTAGAACTCTGAGCGATCGCTTTTCTGATGTTATTAACGTTAAGGACTTCGGGGCTGTTGGTGACGGGGTTACAGATGACACTGCTGCATTTAAAGCTGCTCTCCTGTTCGCCTCTCCATTTGATAGCTTCCCCATTGGCACGAACTTTTTTAATAGCGGTTACTATCAAACATCTGGTGGCACAGTATATGTTCCAAATGGTAAGTATCGACTTACTGAGAATTTATACCTAAATCATGGAGTGTCGCTTATAGGTCAAGAAAGTACGCAAACTAGATGGGGTTCGTCTACAGTTCAAACGTGGAATCAACACGGTTGCGCGAACCTGTATTACGACTTGCCACAGGATGCAGAGGTGATCTGTCTTGATACTGTAGGATTCGACAATACCACAGGCCTCAGATCCACAAATCAAGGTGAGATATTGGGGTCCGACATTGATAGTGGCAAGATCTCGCTAGGTAAAGTTGTTATCAGAAATATAACAATATCTATGGACGAAGGTAAGGCTATTTTTTGTGGATTGAGAGTGGCAGGTTCACCAACATCTGTGATTGAAAATGTAGCAGTTGTCGGCAGACCGCTTATAGCTATTATGCAGTCTGCAAGCTGGGCAGCAAAATGGAAAGATATCTTTACACGTTCGAGCGGTCGCGGGTTGCACATACGAGGAGCAAACGCAGGGGCGACGTTTGAGAATTGCTATATAAGCGGCTTTGGTTTCGCAGGTGTCGGCTTCCCACCAGAACGACCAATAGATCACACTAAGATATTTGAAGGTGCTATAGATGACCAAGGTTTTTCAACTGGTATTAGCTCGACAGATGTAGGGCATATAAATTTTAAAAATGTATTAACTGAAAGTTGGGAAAGAAGCTATATTATATCAAACTGTTACGGGTTGACAGTTGGTGATAGTTATCATGAAAATTTTACAGAGATCGGTTTCGATATATACTCGTCAACTGTAGCAATCGAATCCCCACGATTATCGTCAACAGCTCCAGCTGGTGAACCGCTCAACGCGGTCGGATTGCGTGTTAAGGATTTAACCTACCCTGGCGGTGTGGTAGTGACCCAGACATATCAGGGTCCACCTGTTTACTCACAGGACACTGGTGGATACAGGGTTACAAAGCAGTTCATAGAAGTGGTTTCAGGCTGCGCAGATGGCTCAGTGATAGTTACAGGTGGGCACAGACCAGTGCTCGGTGACGTGTACAACCCTGCTGTGATACTGCCACAGCAATCCGAAGAAGTTGTCAGGTTTTTTGTAGCTGACGCTGATTACACCGATCCAGCTGGTGTTAACATTGTGCCGACAGACGCGGGGCTTGGTTACTCTCACGAACTACCTCTGAAAACAATCGAAGAGGCATTGTCGAGATGCACTAGAGCTGGGACTTACACGATCATACTCGCACGAGGTGGTAACTACTCATTAGCTGATTTATCAGTCGCTAGAAATATTGCAAATGTAAATATAACTATAACAGCAGACACGTCAACGACTGGAGATAATCCAATATTCGGCAAGCCGACTGACGGAAACTATAGACTGCTCACGTTTGAAAATAGCAGTGTTAAATGCTCAAGCACTGTCGATGTTGCAACAGGATCGAATAAAGGGATTTTTAACGCAAAGGGTAGGTCAACGTTTATTTTCGAAGGTTTAATTGATTTCTTAACATCAACAGGAGCCCTTGTTAACTCTGATTATTCAACAGCCGATATTAGCGTTCTAATTTCAGGGACTGCGAGTCTGTCAGGAGTGGGGTTTATAGCCGGTACTAGAGCTAGTGCTAACGGAGAAAGGGGGGTTATCGGGTTTTCTTCTGATATAGATCTCGGAACTATTCAGTCTAACCCATTTAATCCGCTGTTCTGGAGTATTAAATTTGACGGGAGAACTGACTCAACAGGCTATAGAATGTACACGGGGGTTCCAAATATTCCACCGAATTATGTTGGTGAGGAATTATTAGACACTATAAACCTAAATTTTTACAAGGCTATTGGATTGAGTGGCACAGACTGGAAGTTAATGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e429c3cb630d2707b2ab30472fd0f3bb44c741970bba140e4a5b6f291a0da4cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6502
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank