Protein

View in Explore
Genbank accession
YP_009907776.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MMTIRAAAEITLTDINDAIVAGEAPLNPTTDLLWMDSSASPNVLRRWDGEKWVSQTLNIKEADPETSQKIDEAITTANNALVESSTNHKPVFDKAQPSKPLKGDTWFKIDEITKTIIGVFSFNGESWEELPLDYNALRIGKLSAITAELGDVKSGSITGTEFIHNINYKDSDDNLYTGVVKMNDDGFNSTSYLPTGIGSTVLESITSTLGGYKVAQKLIDANGESSLGSSILTGKSLQFNESGNIKLSIDADSFYTTPWQDLILNSGYSTAEGNTPQFRIICIFGIRIAFFRGQVQKSTAWTSTNNAFASVPFEVQTTKTAMAYAPTNKSSGGRVHASSSNAMGFIPADTSITYFALNQLFYILD
Physico‐chemical
properties
protein length:365 AA
molecular weight: 39662,85260 Da
isoelectric point:4,75284
aromaticity:0,09315
hydropathy:-0,21014

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-HM00113468
[NCBI] 		2744802 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009907776.1 [NCBI]
Genbank nucleotide accession
NC_049900 [NCBI]
CDS location
range 27048 -> 28145
strand -
CDS
ATGATGACAATTAGAGCAGCTGCAGAAATAACACTAACGGATATTAATGATGCAATAGTAGCTGGTGAAGCGCCGTTAAACCCAACCACCGACTTATTGTGGATGGATAGTAGTGCCTCACCCAATGTGCTACGAAGATGGGATGGAGAAAAATGGGTCAGTCAAACATTGAATATCAAAGAGGCTGACCCGGAAACTAGTCAAAAAATAGATGAAGCGATAACGACTGCTAATAACGCATTAGTAGAATCAAGTACTAATCATAAACCAGTTTTTGATAAAGCACAGCCAAGTAAGCCACTAAAAGGAGACACTTGGTTTAAAATAGATGAAATCACTAAAACGATAATCGGTGTTTTCTCTTTCAATGGAGAAAGTTGGGAAGAGTTGCCCTTGGATTATAATGCTCTAAGGATAGGCAAACTTTCAGCTATTACGGCAGAACTCGGAGACGTCAAAAGCGGAAGTATCACAGGTACTGAATTTATTCATAATATAAATTACAAAGATAGTGATGATAACCTATACACAGGTGTTGTGAAAATGAACGATGACGGGTTCAATTCAACTTCCTATTTGCCTACAGGTATCGGCTCAACAGTTTTAGAGAGCATCACAAGCACGTTGGGAGGATATAAAGTAGCTCAAAAACTAATTGATGCAAATGGAGAGAGTAGTTTAGGAAGCTCTATTTTGACCGGGAAATCTCTACAGTTTAATGAGAGTGGAAACATTAAGCTTTCTATTGATGCAGATTCGTTTTATACAACACCATGGCAAGATTTAATATTAAACTCTGGATATTCAACAGCGGAAGGGAATACTCCTCAATTTAGAATTATTTGCATCTTCGGTATTAGAATCGCCTTTTTCAGAGGACAAGTACAAAAATCAACCGCATGGACCTCTACAAATAACGCTTTTGCGTCTGTTCCTTTTGAAGTTCAAACAACAAAAACAGCGATGGCTTATGCACCGACAAACAAGTCAAGCGGCGGCCGAGTGCATGCATCATCTAGTAACGCGATGGGATTTATACCTGCGGATACAAGTATTACGTATTTCGCGTTAAATCAATTATTTTATATTTTAGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c35941c3214dbced4c707cd51d9163fc1e945c1e714eddab35df7239ce2bbec0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of L. monocytogenes Strain HM00113468 and its Novel Siphoviridae Phage Allam,M. 2021-03 — GenBank