Protein

View in Explore
Genbank accession
WNL51048.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSESRKRLSLGKKARKTPEKPVLESTDSSDLMLNTLLEETEKKVKELKKIKELNAKKEDSEKEPEEEVETKEEEKEEPSSKRPRLNLGKKKKEEVKEAKVEPPKEKLVTDRNMFSVPEDEKKAAAERLQAKTAAKRAAKKDLKEEVLETAQDRIMSALDGQLSAMGRLAAAADEPAPKSLQEQKIENLEGQVRDMRRMFLEYANMPAQNTIVGGLGAGSPGSGEVRLSKLDDVDTSNLANGRVISYNESTQKFEFTNASSGSDLSGLTDTTITNPQEGESLIYDASTSQFVNSSVSNGGYEFTGAFSDRLDGQSGASDLGSFVAYTSDMAAEDRWYRFGFSQASQTANDNQYWGETDPAFDQTKGLFGGLHMPAGVTDLFDFSYDDGVGGYSEASDGSLKYTAAAGSIDFRQARVGDLALVRFDFNVIPQVANTTLEVAMIWSTRDANDNITFTFPLTGSPLFYGTGTVGRTFLTRPLLTAYFASPEDVNARALLAIRADNPIQIAPLTTLVTLQR
Physico‐chemical
properties
protein length:516 AA
molecular weight: 56551,31650 Da
isoelectric point:4,89085
aromaticity:0,07171
hydropathy:-0,60795

Domains

Domains [InterPro]
DC_2218
STR
27–501
DC_2218
Coil
Unmapped
33–63
Coil Coil Coil
WNL51048.1
1 516
Architecture
STR
STR 27-501 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL51048.1 [NCBI]
Genbank nucleotide accession
OR473000.1 [NCBI]
CDS location
range 97032 -> 98582
strand +
CDS
ATGTCCGAGTCCCGTAAGAGGCTCTCCTTAGGCAAGAAAGCCAGGAAGACGCCGGAAAAGCCAGTGCTAGAAAGCACCGATAGTTCTGACCTTATGCTCAACACTCTTCTTGAGGAGACTGAGAAGAAGGTTAAGGAGCTGAAGAAGATTAAGGAGCTCAACGCCAAGAAAGAGGACTCGGAAAAGGAGCCCGAAGAAGAGGTTGAGACCAAAGAGGAAGAGAAGGAAGAACCTTCCTCCAAGCGTCCTCGCCTCAACCTGGGCAAGAAGAAGAAGGAAGAGGTAAAGGAAGCCAAAGTTGAGCCTCCTAAGGAGAAGCTCGTCACCGACCGCAATATGTTTAGCGTCCCTGAGGACGAGAAGAAGGCCGCTGCAGAGCGTTTGCAAGCAAAGACAGCAGCTAAGCGTGCCGCTAAGAAAGACCTCAAGGAGGAGGTTCTAGAGACCGCTCAGGACCGTATTATGTCGGCTTTGGACGGTCAGTTGTCTGCTATGGGTCGCCTTGCTGCTGCCGCTGACGAGCCCGCACCCAAGTCTCTGCAAGAGCAGAAGATTGAGAACCTTGAGGGGCAGGTTCGCGACATGCGTCGTATGTTCCTTGAGTATGCAAACATGCCTGCTCAGAACACTATTGTTGGTGGTCTGGGTGCTGGTTCTCCTGGTTCTGGTGAAGTTAGACTCTCTAAACTTGACGACGTTGATACCAGTAACCTTGCTAACGGTAGGGTTATCTCCTATAACGAGTCCACTCAGAAGTTTGAGTTCACCAATGCCAGCAGTGGTTCTGACCTCAGTGGACTGACTGACACGACTATCACCAACCCCCAGGAAGGTGAGTCACTAATTTATGACGCTTCCACTTCGCAGTTCGTAAACTCTTCTGTTTCTAACGGTGGTTATGAGTTCACGGGTGCTTTTTCTGACCGTCTAGACGGTCAGTCCGGTGCAAGCGACCTTGGTAGCTTTGTTGCTTACACGTCAGATATGGCTGCCGAAGACCGCTGGTATCGCTTTGGTTTCAGCCAAGCTTCTCAAACTGCTAACGATAACCAGTATTGGGGTGAGACTGACCCTGCTTTCGATCAGACGAAGGGTCTGTTTGGTGGTCTCCACATGCCTGCTGGTGTGACTGACCTGTTTGACTTCTCTTATGACGACGGTGTTGGTGGTTACTCTGAAGCTTCCGACGGTTCTCTGAAGTACACAGCTGCTGCTGGTTCTATTGACTTCCGCCAAGCTCGTGTGGGTGACTTGGCACTGGTTCGTTTTGACTTTAACGTTATTCCTCAGGTTGCTAACACGACCCTTGAGGTTGCGATGATTTGGTCTACTCGTGACGCTAACGACAACATCACGTTTACTTTCCCACTTACCGGTTCTCCACTGTTCTACGGTACTGGAACCGTTGGTCGTACTTTCCTAACACGTCCTCTGCTGACTGCATACTTTGCTTCGCCTGAAGACGTTAACGCCAGGGCACTTCTGGCAATCCGTGCGGACAATCCTATCCAGATTGCTCCTCTCACAACCCTCGTCACCCTCCAACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fbe9bac1b713608f00fc6d09c3a119b99682812b962a169a8b4e543193488c7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6997
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank