Protein

View in Explore
Genbank accession
XNY56537.1 [GenBank]
Protein name
non-contractile tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPELDSLFTEYVERGTDGRHLLINTSNGDWWLLAKSGTTIVNSGNDPYFITTVGQTSLQTASIAGLTYILNTEMSPVTTVDNTGRVDPSTTGFFYVKAAAFQKRWNVTVTSAGVDYSGDYSAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPEEADGAMCRVGTASSETAWYQFNYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSDPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPDNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQDGVFEVPTVLRPVGWADSYKDNLILTYLSSDAMGPTEVGIKEIAGENTLSVVRGVPDGTYVLGMRYKSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWSGELTGILMNSKELTLGQTLRMDLATITVPCRTNADTTEVTLFTAGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85976,12010 Da
isoelectric point:4,76307
aromaticity:0,08651
hydropathy:-0,23333

Domains

Domains [InterPro]
IPR058003
TTP
4–786
IPR058003
XNY56537.1
1 786
Architecture
TTP
TTP 4-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNY56537.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9938
Central domain 147 345 200 0,0981
C-terminal 346 786 440 0,1220
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_JKT1
[NCBI] 		3386301 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNY56537.1 [NCBI]
Genbank nucleotide accession
PQ735928 [NCBI]
CDS location
range 27533 -> 29893
strand +
CDS
ATGGCCCAGTCCCTAGAGGGTACCATTCAGAGCCTGCTGCAGGGCGTCTCCCAGCAGGTTCCAAGAGAGCGCCAGCCCGGGCAACTGGGGGCGCAGCTGAATATGCTCAGCGACCCTGTTTCCGGTATCCGCCGCAGACCTCCGGGTGAGATTGTCTGGGAGAGCACAATCGACAACCCGGAGCTTGACTCCCTGTTCACGGAATATGTAGAGCGCGGTACTGACGGCAGGCACCTGCTGATTAATACGAGCAATGGTGACTGGTGGTTGCTGGCTAAGAGTGGAACGACCATCGTTAATTCTGGAAACGACCCGTACTTTATTACTACCGTAGGCCAGACCTCTTTGCAGACCGCGAGTATTGCTGGATTGACCTATATCCTGAATACGGAGATGTCTCCGGTTACTACCGTGGACAACACTGGGCGTGTCGACCCCAGCACAACTGGGTTCTTCTACGTTAAGGCTGCAGCATTCCAGAAACGTTGGAATGTTACCGTTACATCTGCGGGGGTAGATTACTCCGGGGACTACTCCGCACCGGCTGCTGGTAGCACCAGCGGCAATGCTGAGGAGGTATCAGGTGCCTACGTTGCCCAGCAGCTGCGGGACTCTCTTGTAGCGAACGGGCTGCCAGCTGGGAACGTGAGCGTACGTGGCGCGTACCTGTTCTTCTATGGGTTGAGTAACTGTGTGGTATCCTCCGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGCGTAGACCAGGAGCAGGACCTACCTGCACAGCTCCCCGAAGAAGCCGATGGGGCAATGTGCCGTGTAGGGACAGCCTCGTCCGAGACAGCGTGGTACCAGTTCAACTACAGCACCCGCACCTGGTCCGAGGTGGGGGCGTACGGTAGCATCACCAAGATTACGAACATGCCCAGAGAGCTCGCCGCGGATGACAACATTATTGCGCGGGATTGGGAGGGGCGCTTAGCGGGCAACGACGACAACAACAGCGACCCCGGGTTCGTCGAGAACGGCTATATTACTGGAATTGCAGCCTTTCAGGGGCGCCTGGTTCTGCTGAGTGGCAGCTCCGTGGATATGTCGGCCTCGGGCCTATATCAGCGCTTCTACCGCTCTACTGTGACGTCTCTGCTGGATACGGACCGTATCAGTATTAGCTCTGCGTCTGCGCAGGATTCGGTGTACCGCACCGCTGTGCAGTTCAACCGGGACCTGGTCCTGTTTGCTAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACGCCAACTAACGCAAGTATTAGTATTACCAGCACCTACGATTGTGACAGCCGCGTTACCCCGGTAATGGCGGGTCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCGGGTATACTGGAGCTAATCCCATCACCTTATACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTAGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAATAGCCTGCTGGTCTACGAGTTCATGTGGGGTGGAAGTGATGGTGCTAAGATGCAGGCGGCATGGCATAAGTGGTCTTTCCCATATCCAATCCTGAGTGTGCAGGCGCTGGAAGATGAGGTGTTCTTGTATATGCAAGGGCCTAGCCCAGACAACAAGCTTTTGATTGTGTCTATGGACCCACGAGAGGGTTATCAGCTTGGCTCAGAATACCGTGAGGCGTACTCGGATTTGCAGAAGCAAGTTCAGGTACAGGACGGGGTGTTCGAGGTTCCGACAGTACTACGCCCAGTTGGGTGGGCTGACAGCTACAAGGACAACCTTATCCTGACGTACCTCTCCAGTGATGCAATGGGGCCTACCGAGGTAGGTATCAAGGAGATTGCTGGGGAGAACACCTTGAGTGTCGTCCGGGGCGTGCCGGATGGTACGTACGTACTTGGTATGCGCTATAAGAGTACATTCACCCTCACTACGCCTATTCTGCGTGACCAGAACGACAAGCTAGTGGGGAGTGGGCACGTGCGCCTACTGCGCCTGGATGTAGCGGTGCGTAACTCTGGGCACTTCGATGTACAGGTACTGGACACCCCACGGGACGTCAACTGGAGTGGAGAACTAACCGGTATCCTGATGAACTCAAAAGAGCTAACGCTCGGGCAGACCTTGCGTATGGACTTGGCTACCATTACCGTACCGTGCCGTACTAACGCAGACACAACCGAGGTGACGCTGTTTACTGCGGGTTCTATGGAACTGAACGTGCTGGATATCTCGTACATCCTGCGCTACAACCAACGCAGACGGAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
498f1f2810b2d63c06e6557f531c2e1b99941bf5332ea76136ff0ca2c52f36cf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3164
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Morphological and genomic characterization of specific ESBL-producing Klebsiella pneumoniae podoviruses Saharman,Y.R., Safitri,N.A., Pramono,A.K., Safari,D., Saptawati,L., Anggraini,D., Sarassari,R. and Mardiana,M. 2025-12-01 — GenBank