Protein

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Genbank accession
YP_277441.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEIMPQGILIDLNDGRPAMEITAGLRVPAVTGSINTSGLSSPASSWDFGLTMTPGSTAFCLPTQAVYVDAYDVIPEVYYMNGFSKVNDGVGRITLSNFNGANGRILQFGGQCFEILPASSQSSPGVLVENSTDFTAISSNSRLMTAAWVGGIQVNGSASLPVAAFLLVNGITKTVSLESDGSTIWCRDITYNGIDDVAASTYVQLVIFNNTPPVAGPGLTISNSAGQIVFSSVRRPFVLSGFMQINNGYQSVNGGFFPILRCGATTRVTGGYNNLRYKGVCMSGGSVRAVPGTVIGNYSTQTGAQFPFDTNISMALPFIPNFY
Physico‐chemical
properties
protein length:323 AA
molecular weight: 34040,17480 Da
isoelectric point:4,91591
aromaticity:0,09907
hydropathy:0,20124

Domains

Domains [InterPro]
IPR045604
STR
7–300
IPR045604
YP_277441.1
1 323
Architecture
STR
STR 7-300 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_277441.1
1 323
Domain Start End Length (AA) Confidence
N-terminal 1 88 88 0,1858
Central domain 89 287 200 0,0207
C-terminal 288 323 35 0,9911
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-88
Central
89-287
C-terminal
288-323

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Jk06
[NCBI] 		2886922 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_277441.1 [NCBI]
Genbank nucleotide accession
NC_007291 [NCBI]
CDS location
range 336 -> 1307
strand +
CDS
GTGGAAATAATGCCTCAAGGTATCTTGATAGATTTGAATGACGGAAGGCCAGCAATGGAAATCACAGCTGGCTTGAGAGTTCCAGCCGTGACTGGTTCAATAAACACTAGCGGGTTAAGCTCACCAGCATCATCATGGGATTTCGGTCTGACTATGACTCCTGGCTCAACAGCATTCTGCCTGCCAACTCAGGCTGTTTATGTTGATGCATATGATGTTATACCAGAAGTTTATTACATGAATGGGTTCTCGAAGGTTAATGATGGGGTTGGAAGGATTACATTAAGTAACTTTAACGGCGCTAATGGTCGCATATTGCAGTTTGGCGGTCAGTGCTTTGAGATTTTACCAGCATCATCACAATCAAGCCCCGGTGTCCTTGTTGAGAACTCGACTGACTTTACAGCGATATCAAGCAATTCCAGATTAATGACTGCTGCTTGGGTTGGTGGCATCCAGGTTAATGGCTCTGCATCATTGCCAGTTGCGGCATTCCTTTTGGTAAATGGGATAACCAAAACGGTATCACTTGAAAGTGATGGTAGTACGATATGGTGTAGGGATATAACGTACAATGGGATTGATGATGTTGCTGCAAGTACTTACGTTCAGTTAGTTATTTTCAATAATACACCTCCAGTAGCTGGTCCGGGTTTAACGATATCAAACAGCGCTGGGCAGATAGTTTTCTCTAGCGTCAGGAGGCCATTTGTTCTAAGTGGATTTATGCAGATTAATAATGGTTACCAGTCGGTGAATGGTGGGTTCTTCCCAATACTTAGATGCGGAGCGACAACTAGAGTCACTGGTGGATATAATAACTTACGATACAAGGGTGTTTGCATGTCTGGAGGTTCAGTTAGAGCCGTCCCAGGCACTGTTATAGGTAACTATTCAACTCAAACTGGCGCGCAATTCCCATTTGATACAAACATATCAATGGCACTTCCATTTATTCCCAACTTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a137cbd2b2ca8f3c9cab42ba696127b7a8071225a70207fdec6626b11ccecd4c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage JK06 is a highly specific type for pathogenic E. coli O157:H7 Kagan,J. and Kuhn,J. 1988-07 — GenBank