Protein

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Genbank accession
APU93301.1 [GenBank]
Protein name
baseplate protein tal-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALNNQYLILDSHLNNIGILTVDGATKFTSDSISMQIADTDNTNTQYDDDVSAGTDDNYRTEINSNFQSKHYDHSGTVTVPQGQPDSDKVVSGNYLAYYDKFLDRWYVMYIYTTTEESTSTASVNTVAHVCNMMLRDLAFSIPEAATIKNDTIQTVFSHVFQNSGWTVEYNTNNTSIQNSDSFDGKTKATVLLQDVLQLFGVEITAYVKINSQGKITDKIAEVTDELSSGVVYEEAVFGKNITQIKRTTVSAPITKLYVYGPNGTTMKSRNDGKDYIVDDNANQLYNYEGSKVNSYLEGVITSSQIESASGLKSWGQQILTLFNHPRTFYEVNVSPDFLPPLGATIRFKDKHITPALNATGRVIQRTISFSNPNSNSIAFGEFVTVPVATPAWLTNYQSALADAVSKAITDASAITPVLSHPDGLDFAQGETSKRLILSAWVGKQNISTYVDSKGFAWRHINTDGSIDPNWEATGDLIKVTPSLMGNIRAYIDGDYISTDPELHIDNQSFKLIGSFAPNDNPVGRVAQHMEPLDDGSWYQSSAHDNGADTNFIYRDKNLNYVSRMVLKNGGHGTSFGVKYINGSPWIITAMKNKVNDWDIVRFQFKAGATLGYNDVVHLFDTHHYARVNYDRKNDRLAYCDAAFNYRIVNMEDAENGIQTVEYSINWLDYDFTGDDQIVQGQTLDFPYVYWNVGNQGLKVSTELYCVNVIHKGEVFHAYYDPEEQLGITNKTIEPEGLGFYDFGDGYKLVNSFNVVPNDGSQKHQMIYTSDFIRREEMPVINNGSNNEDE
Physico‐chemical
properties
protein length:790 AA
molecular weight: 88284,58810 Da
isoelectric point:4,79951
aromaticity:0,11139
hydropathy:-0,42468

Domains

Domains [InterPro]
DC_1956
STR
1–575
DC_1956 DC_1974
IPR007119
Unmapped
68–381
IPR007119 IPR048799
IPR010572
ENZ
137–383
IPR010572
APU93301.1
1 790
Architecture
STR
RBD
STR 1-575 | RBD 576-788 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APU93301.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 550 550 0,9899
Central domain 551 779 230 0,1476
C-terminal 780 790 10 0,0758
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-550
Central
551-779
C-terminal
780-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage P2
[NCBI] 		1928330 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APU93301.1 [NCBI]
Genbank nucleotide accession
KY381600 [NCBI]
CDS location
range 23570 -> 25942
strand +
CDS
ATGGCATTAAATAATCAATATCTAATTCTCGATTCACACTTAAACAATATTGGCATTTTAACGGTTGACGGTGCCACTAAATTTACCAGCGATTCTATATCTATGCAAATTGCTGATACGGACAATACAAATACTCAATATGACGATGACGTTAGTGCAGGTACTGATGACAATTATCGGACAGAAATAAACTCAAATTTTCAATCTAAACATTATGACCATAGCGGAACCGTGACTGTTCCACAGGGACAACCAGATAGCGATAAGGTAGTATCTGGGAATTACTTAGCATATTATGATAAGTTCTTAGACAGATGGTATGTTATGTATATATACACAACCACAGAAGAGTCAACATCAACAGCTTCTGTTAATACAGTCGCACATGTATGTAACATGATGTTAAGGGACTTAGCTTTTAGTATTCCAGAGGCGGCAACTATTAAAAACGATACTATTCAAACAGTTTTTTCACATGTTTTTCAAAATTCTGGGTGGACGGTAGAGTATAACACCAACAACACGTCTATTCAGAATAGCGATTCTTTTGACGGTAAAACAAAAGCTACGGTATTATTACAAGACGTATTACAGTTATTTGGAGTTGAAATTACTGCCTATGTAAAAATAAATAGCCAAGGAAAAATAACAGACAAGATAGCAGAAGTGACAGACGAACTATCTTCCGGGGTTGTTTATGAAGAAGCAGTTTTTGGAAAAAATATCACGCAGATAAAAAGAACAACAGTTTCTGCGCCAATCACAAAACTGTATGTCTATGGGCCGAACGGTACTACAATGAAGTCTAGGAACGATGGCAAAGACTATATTGTAGATGATAACGCAAACCAATTATATAACTATGAGGGTTCAAAAGTAAACAGTTATTTAGAAGGTGTTATCACTTCTAGTCAAATTGAATCAGCTTCTGGTCTAAAATCTTGGGGACAACAAATATTAACCCTGTTTAATCACCCTAGAACATTTTATGAAGTAAACGTTAGCCCTGATTTTTTGCCACCATTAGGCGCTACGATTCGTTTTAAGGACAAACACATTACACCAGCGTTAAACGCTACTGGACGAGTTATTCAGAGAACAATCAGCTTCTCAAACCCTAATAGTAATAGCATTGCGTTTGGTGAGTTTGTAACCGTCCCGGTAGCTACTCCAGCATGGTTGACAAATTATCAATCAGCATTGGCAGACGCCGTTTCAAAAGCCATTACGGACGCTTCTGCTATCACTCCAGTGTTATCTCACCCAGATGGCCTTGATTTTGCTCAAGGTGAAACATCAAAGCGTCTTATATTGAGTGCATGGGTTGGAAAGCAAAATATTAGCACTTACGTTGATAGCAAAGGGTTCGCATGGCGGCATATCAACACAGATGGTTCAATCGACCCGAATTGGGAAGCAACGGGCGACTTAATTAAAGTTACTCCATCTTTGATGGGTAATATTCGGGCATATATTGATGGTGATTATATATCGACAGACCCAGAGCTCCATATTGATAATCAATCTTTCAAATTAATTGGAAGCTTTGCCCCGAATGACAATCCCGTTGGTCGAGTTGCGCAACACATGGAACCGCTTGATGATGGTAGTTGGTATCAGTCTTCTGCCCACGACAATGGGGCAGACACCAATTTTATTTATAGAGATAAGAACCTAAATTATGTTTCAAGAATGGTTCTTAAAAACGGAGGACACGGGACTTCTTTTGGGGTTAAGTATATTAATGGCTCTCCGTGGATAATTACTGCCATGAAAAACAAAGTAAATGACTGGGATATTGTAAGATTTCAGTTCAAAGCCGGTGCAACACTTGGTTACAATGATGTAGTTCATCTCTTTGACACTCATCATTATGCGAGAGTAAATTATGATAGAAAAAATGACCGGCTTGCTTATTGTGACGCCGCATTTAATTATCGTATCGTCAATATGGAGGACGCAGAAAATGGTATTCAGACAGTCGAATATTCTATTAATTGGTTAGACTATGATTTTACCGGAGATGACCAAATTGTTCAAGGTCAAACCCTCGATTTTCCATATGTTTATTGGAACGTTGGGAACCAAGGATTGAAAGTATCAACCGAACTGTATTGCGTGAATGTTATTCACAAAGGCGAAGTATTTCATGCCTATTATGACCCAGAGGAACAACTTGGAATAACTAATAAGACGATTGAACCAGAAGGGTTAGGTTTTTACGATTTTGGTGATGGTTATAAACTGGTTAATTCATTCAATGTCGTTCCAAATGACGGCTCACAAAAACATCAAATGATTTACACATCTGATTTTATCCGCCGTGAAGAAATGCCGGTCATCAATAACGGTAGTAATAACGAAGATGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6efe5024f06447379f5eb2bc316b772a0477bcefc060db1f07636305471ab918
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Lactobacillus virulent phage P2 Chen,X., Fan,M., Liu,Y., Wang,Z., Wu,W. and Zhang,H. 2021-02-05 — GenBank