Protein

View in Explore
Genbank accession
QOC54277.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MAGVNGRYDSVILGVSQQTPHDRRSGQMESQDNFLSDPVRGLARRWGTLQNASQLVSSAALADPTLVTLAGKFNTKPFYCDGREYELIYAKQATPETGPLFCYDRLNKKFLNVQFGGAAGSLANKIKTAGVASLVNIGRFMLVAVNGFNPTYTQKEVMPAPNKARNGVIWIRQGAYSRTYSVDIKRPDGSVATVSHKTMSAAYEGVLDTSDIPWDKEDPGKYNKAVADRTNAYNTAVTKHIAASTEDIQPDTIAKKLRDKIATQLGIGNNVSVRGAYVHFEYGANISNVTSTDGGDSTYVRTVVDTVDDIDKLSPWHYNGKVMRISPKKQSDTDAYYVRATSKTGSSFGEVTWKECPGVEYTPTAAFCVAWADGNTLFVGSTPEELNAMSGNKADAPKFEPSVVGDAKTSPLPYFMTGKSINYLGIFQDRLLIVSGAVVFASRPGDYFNWFRSTVLAVDDADPVEMYALGSEDDIIRWDSSFDRNHILHGERNQYLLPGRTVLSPKSPSIQIMGSQQGTTGSEPKAAGSYVFFTKGTSYGGSLHQIQMGASSDSSESFECSSQLDTYISGKPVQVVSMTAPYFVLLRLNNSLNEIFVYTYLDSMQGGERMYDSWSRWTWDPALGPCCGLSHFNDELVKFTFRRGLGGTYLVADQCYTHSELSTRPYLDSMLNFGSVKEQLKNWPKEITDRLMVVYETGDKAMLGAPYNRLSTDMPELLEPANASKAVVGYQFDAICRTTNPFMRDRDGKSIINGRLTLSNLTLSTVNSGGVEGFVEFSGRRKQTVRFEGRLLTRTTNRVGRSPVVDAGVKLPVFHEVRECQVEFRALTWLPLTVAGIEWKGQFFNNLRRV
Physico‐chemical
properties
protein length:850 AA
molecular weight: 93838,61970 Da
isoelectric point:7,87380
aromaticity:0,10235
hydropathy:-0,34294

Domains

Domains [InterPro]
IPR058003
TTP
1–848
IPR058003
DC_0058
STR
1–850
DC_0058
QOC54277.1
1 850
Architecture
STR
STR 1-850
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOC54277.1
1 850
Domain Start End Length (AA) Confidence
N-terminal 1 152 152 0,8778
Central domain 153 351 200 0,4015
C-terminal 352 850 498 0,4275
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-152
Central
153-351
C-terminal
352-850

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Atoyac13
[NCBI] 		2767549 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOC54277.1 [NCBI]
Genbank nucleotide accession
MT682388 [NCBI]
CDS location
range 4018 -> 6570
strand +
CDS
ATGGCAGGTGTAAACGGTCGCTATGACTCTGTGATTCTCGGGGTGTCTCAACAGACGCCCCACGACCGGCGCAGCGGTCAAATGGAAAGCCAAGATAACTTCCTGAGTGACCCGGTGCGTGGGCTGGCCCGCCGCTGGGGCACACTCCAGAACGCATCCCAGCTGGTTAGCTCAGCTGCACTCGCAGACCCAACACTGGTCACCCTTGCTGGAAAGTTCAACACCAAGCCCTTCTACTGTGATGGGCGAGAGTACGAGCTTATCTATGCAAAGCAAGCGACCCCAGAGACGGGCCCGCTGTTCTGCTACGACCGGCTGAACAAGAAGTTCCTGAATGTGCAGTTCGGTGGTGCCGCTGGCAGCCTTGCCAACAAAATCAAGACAGCCGGTGTCGCCAGCTTGGTGAACATCGGTCGCTTCATGCTTGTGGCCGTGAACGGGTTCAACCCGACGTACACGCAGAAAGAAGTGATGCCTGCCCCGAACAAAGCACGCAACGGCGTCATCTGGATTCGACAGGGTGCGTACTCCCGAACCTACAGCGTGGACATCAAGCGCCCGGATGGCTCGGTAGCCACTGTGTCACACAAGACCATGAGCGCCGCCTATGAGGGCGTGCTGGATACCTCCGACATCCCTTGGGACAAGGAAGACCCCGGCAAGTACAACAAGGCAGTGGCCGACCGGACGAACGCCTACAACACGGCGGTGACCAAGCATATCGCGGCGTCCACCGAGGACATCCAGCCGGACACAATCGCCAAGAAGCTGCGGGACAAGATAGCAACCCAGCTGGGCATCGGCAACAACGTGTCGGTGCGGGGTGCGTATGTGCACTTTGAGTACGGCGCGAACATCTCGAACGTGACCAGTACGGACGGCGGCGATAGCACCTACGTGCGGACCGTAGTTGACACCGTGGACGACATCGACAAGCTCTCACCGTGGCACTATAACGGAAAGGTGATGCGCATCTCTCCCAAGAAGCAGTCGGACACCGACGCATACTACGTCAGGGCCACCAGCAAGACCGGTAGCAGCTTTGGCGAGGTTACTTGGAAGGAGTGCCCGGGTGTCGAGTACACGCCCACAGCGGCCTTCTGTGTGGCTTGGGCGGACGGCAACACCCTTTTCGTGGGCTCCACACCGGAGGAGCTGAATGCCATGTCCGGTAACAAGGCGGATGCCCCGAAGTTCGAGCCATCGGTAGTCGGAGACGCGAAGACCTCTCCTCTACCGTACTTCATGACCGGCAAGAGCATCAACTATCTGGGCATCTTCCAAGACCGCCTGCTCATTGTATCGGGTGCCGTGGTGTTCGCTTCGCGGCCCGGCGATTACTTCAACTGGTTCCGGTCAACGGTACTGGCTGTGGACGACGCCGACCCGGTGGAGATGTATGCCCTCGGCAGCGAGGACGACATCATCCGGTGGGACTCCAGCTTCGACCGAAACCACATCCTGCATGGCGAGCGAAATCAGTACCTCCTGCCGGGACGGACGGTGCTGTCCCCGAAATCCCCGAGCATCCAGATAATGGGCTCGCAACAGGGGACTACCGGGTCAGAGCCGAAGGCGGCGGGCTCCTACGTGTTCTTCACCAAGGGGACCTCGTATGGTGGCTCTCTGCACCAAATCCAGATGGGAGCCAGCTCGGACAGCTCGGAGTCCTTCGAGTGCTCTAGTCAGCTAGACACCTACATCAGCGGTAAGCCGGTGCAGGTGGTGTCCATGACGGCCCCGTACTTCGTCCTGCTTCGCTTGAACAACAGCCTGAACGAAATCTTCGTCTACACCTACCTCGACTCAATGCAGGGCGGTGAGAGGATGTACGATAGCTGGTCACGCTGGACTTGGGACCCGGCACTGGGTCCCTGCTGCGGACTGAGCCACTTCAACGACGAGCTTGTCAAGTTCACCTTCAGGCGTGGTCTGGGCGGGACGTACCTTGTGGCGGACCAGTGCTACACGCACTCGGAACTCTCGACCCGGCCCTATCTGGATTCCATGCTGAACTTCGGCAGCGTCAAGGAGCAGCTCAAGAACTGGCCCAAGGAAATCACGGACCGGCTCATGGTGGTATATGAGACGGGCGACAAGGCTATGCTGGGTGCGCCGTACAACCGGCTGAGCACCGACATGCCTGAACTGCTGGAACCGGCCAACGCCTCCAAGGCCGTGGTGGGGTATCAGTTCGACGCCATCTGCCGGACCACGAACCCATTCATGCGGGACCGGGATGGCAAGAGCATCATCAACGGTCGGCTGACCCTGAGCAACCTGACCCTGAGCACTGTCAACTCTGGCGGTGTTGAGGGCTTCGTGGAGTTCAGCGGTCGGCGCAAGCAGACGGTCCGCTTTGAAGGTCGCCTCCTCACCCGGACCACCAACCGGGTAGGGCGCTCCCCTGTGGTGGATGCTGGCGTTAAGCTGCCGGTGTTCCACGAGGTTCGGGAGTGTCAGGTTGAGTTCAGGGCCTTGACATGGCTCCCGCTCACTGTGGCGGGAATCGAGTGGAAAGGTCAATTCTTCAACAACCTACGGAGGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f7b0ed05391deaa22c99f951f46cb2cbad391019e607477379c4d0d18b0c0887
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2993
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dynamics of infection in a novel group of promiscuous phages and hosts of multiple bacterial genera retrieved from river communities Cazares,D., Cazares,A., Figueroa,W., Guarneros,G., Edwards,R.A. and Vinuesa,P. 2020 — GenBank
A novel group of promiscuous phages Cazares,D., Cazares,A., Figueroa,W. and Vinuesa,P. 2020 — GenBank