Protein

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Genbank accession
QHR72979.1 [GenBank]
Protein name
tail protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPVYQGSYKSILGGVSQQVYTDRQLSQVEEQVNMTSDTVRGLRKRPGTRLSRDVSSTNATVWSLGNFGHLRFYTTNLGWGITTFIVNTKTGYVTSIVETETVQFMGQSNYLIANNPDDIVFTTVGNTMYVANCSKLPVLIENETRMNPGRRGYYFVIAGAYGKQFTVRVQTKLGAVSATYTTPESSSTTGNPSQESTPEYIVGQLKSQLDTHVGGAEGIEVVAQDGAYLYIQCTEAAADMNVSTSTGSSYAIASNTHTVDLTTKLPARLPAAAGGFIMTVGDASFAQYFQWSYNDSRWVEKGAYGSPTGINPSTMPLVFKTSSTANQHTFSQGSWPGRLAGDDLTNSIPAFTDANGVGITGLASFQGRLIVFSGPYITMGSSNKDDRNNFFRTTVTQVLDDDRIEFTASSFAGASFRYGVPFNSDLILASEEHQAVIPGRNQILTPNNATAVLTSTYQMDTGVAPTTSGRSLYYSYPRSNSSFSVKEMLPSGYTDLQYVSQDVTDHLPTYLEGANSYISASTTNNIVVFGSTTEKSTLYVNEYLWSGDEKVLSSWHRWELYGTIHAAWFVREVLVMLVEQNGHMNMLTLSMRDSPDPTDPARFLPATDYSQLMTVTNPATDNSYIQFAADGIQKALWDIIQARYLADGNWDFMTTVVPSGQYIGAEVGIKSIDTANRRVYLQPSYGSTSLYVGLRFTATFSPTPPRIFNGDGSYMDVNKMVIMHYNFTLRYTSLFTITASDRGAYSALNIISSPIRYTSQELGLESATLAKRAHLKVRMGLEVESSSMVVTSTTAGDLNIQGLGYYVKFYNKVRRI
Physico‐chemical
properties
protein length:816 AA
molecular weight: 89602,13880 Da
isoelectric point:5,75173
aromaticity:0,11029
hydropathy:-0,22206

Domains

Domains [InterPro]
IPR058003
TTP
1–816
IPR058003
DC_0058
STR
1–816
DC_0058
QHR72979.1
1 816
Architecture
STR
STR 1-816
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR72979.1
1 816
Domain Start End Length (AA) Confidence
N-terminal 1 596 596 0,7364
Central domain 597 795 200 0,2857
C-terminal 796 816 20 0,7304
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-596
Central
597-795
C-terminal
796-816

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage smaasur
[NCBI] 		2696444 Uroviricota > Caudoviricetes > Autographivirales > Stentvirinae > Bonnellvirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR72979.1 [NCBI]
Genbank nucleotide accession
MN850625 [NCBI]
CDS location
range 560 -> 3010
strand -
CDS
ATGCCAGTTTACCAAGGCTCGTATAAATCCATCCTCGGCGGCGTAAGCCAGCAGGTCTATACTGACCGACAGCTATCGCAGGTTGAGGAACAGGTCAACATGACCTCCGATACCGTTCGTGGCCTGCGCAAGCGCCCCGGCACTCGCCTAAGTCGTGACGTAAGTTCGACCAACGCGACTGTATGGAGCCTTGGAAATTTTGGCCACCTCCGGTTCTACACCACTAACTTAGGGTGGGGGATTACCACGTTCATCGTTAACACGAAGACTGGGTACGTGACCTCCATCGTGGAGACAGAGACTGTCCAGTTCATGGGTCAGTCGAATTATCTCATCGCAAATAACCCCGACGACATTGTATTCACGACCGTAGGCAACACCATGTACGTTGCCAACTGTTCCAAGCTGCCCGTGCTAATCGAGAACGAAACGCGAATGAATCCGGGTCGCCGGGGTTACTATTTTGTTATCGCTGGTGCTTACGGTAAGCAGTTCACCGTGCGAGTGCAGACCAAGTTGGGCGCAGTGAGTGCAACGTATACTACGCCGGAAAGCTCATCAACAACGGGCAACCCTTCACAAGAGTCCACGCCGGAGTACATCGTCGGTCAGCTCAAGTCTCAGCTCGACACGCACGTAGGCGGGGCTGAGGGTATAGAAGTCGTGGCACAGGATGGTGCGTACCTGTACATCCAGTGTACCGAAGCTGCTGCCGACATGAACGTATCTACCTCGACTGGTTCAAGCTATGCCATTGCATCCAACACCCACACGGTAGACCTTACCACTAAGCTCCCGGCGAGATTGCCTGCGGCGGCGGGTGGGTTCATCATGACTGTGGGCGACGCCAGCTTCGCTCAATACTTCCAGTGGAGTTACAATGACTCACGCTGGGTTGAGAAAGGTGCCTACGGCTCCCCGACCGGGATTAACCCAAGCACCATGCCGTTGGTGTTCAAGACCTCATCTACCGCGAACCAGCACACTTTCTCTCAGGGTAGCTGGCCGGGCCGCTTGGCTGGCGATGACCTGACCAATTCCATCCCTGCATTCACTGATGCTAATGGCGTGGGTATTACTGGCTTGGCCTCGTTCCAAGGTCGCCTGATTGTATTCAGTGGCCCGTACATCACAATGGGTTCCAGCAACAAGGATGACCGGAACAACTTCTTCCGCACCACTGTTACGCAGGTGCTGGACGATGACCGCATTGAGTTCACAGCATCCAGCTTCGCCGGGGCTTCGTTCCGGTACGGGGTGCCGTTCAACTCTGACCTGATTCTGGCCAGTGAGGAACACCAAGCAGTCATCCCCGGACGTAACCAAATCCTCACGCCGAACAACGCCACCGCCGTGTTGACCTCGACGTACCAGATGGACACTGGCGTAGCGCCGACCACCTCTGGCCGCAGCCTGTATTATTCGTACCCGCGCTCGAACAGCTCATTCTCCGTCAAGGAGATGCTACCGTCCGGTTACACGGATTTGCAGTACGTGAGTCAGGATGTGACCGACCACCTGCCGACTTATCTGGAAGGGGCTAACAGCTACATCTCTGCCAGCACCACGAACAACATCGTAGTGTTCGGCTCGACCACTGAGAAGTCCACGCTATACGTGAACGAGTACCTCTGGTCAGGCGATGAGAAGGTGTTGTCGTCTTGGCATCGCTGGGAGCTGTACGGCACTATCCACGCCGCATGGTTCGTCCGTGAAGTGCTGGTGATGCTGGTTGAGCAGAACGGCCACATGAACATGCTTACGCTGTCCATGCGAGATTCTCCAGACCCGACTGACCCAGCGCGTTTCCTCCCGGCAACGGATTACAGTCAGCTCATGACTGTGACCAACCCGGCGACGGACAACTCGTACATCCAGTTCGCGGCTGACGGAATCCAGAAAGCGCTGTGGGATATCATCCAAGCCCGGTATCTGGCTGATGGCAACTGGGACTTTATGACCACGGTTGTGCCGTCCGGTCAGTACATCGGTGCCGAGGTTGGTATCAAGTCCATCGACACTGCGAACCGACGTGTGTACCTGCAACCCTCGTACGGCAGCACGTCGCTGTATGTGGGCCTGCGATTCACTGCAACGTTCAGCCCTACGCCGCCGAGAATCTTCAACGGCGACGGTTCGTACATGGACGTGAACAAGATGGTCATCATGCACTACAACTTCACGTTGCGGTACACGAGCCTCTTCACTATCACGGCCAGTGACCGTGGGGCGTACTCTGCACTGAACATCATCTCCAGCCCGATTCGATACACGAGTCAGGAGCTTGGTCTGGAGTCAGCAACTCTGGCGAAGCGTGCGCACCTCAAAGTGCGTATGGGTCTGGAGGTTGAGTCCAGCAGCATGGTGGTCACGTCCACTACAGCAGGCGACCTGAACATTCAAGGTTTAGGTTATTACGTCAAGTTCTATAACAAGGTTCGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
91a382a55f55bc2529d069583b20c5800218b5142401257f36c17359bd380ff1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2861
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank