Protein

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Genbank accession
UPU15721.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,76
Protein sequence
MAIPSFLNFLEESKQLDEAFNSSPYELTFGKKNAGDIFFTFVDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGVTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMKGVTWDDPDKVGDVPDQKNNPDVGVSSSVDDSNGWKLTSDGNQPMMIWSGREKGRLVTANIAPHYNEPGVYVGAYMNEKSVRGQSADFIARQLKLPQVPISILNDFTTASTKFWKGSQQKSAPVDSNTTIGATSIEQLIDSGFVARVLGIIDTNIDQKASYLPGESIKKIGQARYQTKGGLVIIVSFDSVDGKNLKYSVFSEIETQPGVISGDARRVANEVMETITYVAEHQYRGEWEINAVPMSAPYPIKSIRHSQGWGYVETANWTLKIADAVLNRVKPGNTALLELNKEPLRGKHLLEIIPEKGDKTLMLKDRSGAIYGSIDLNAQGADLVNSGTLKIPSNAMVFGETVNGMSVTWTGVNFPKGGKYDGAVLTTNVTYYYDKGKVAFTPMVSNKGRTLNNPKTYELPLKKEFVQGVLDDTSDEMSMVTRNMQTLVSTNYNPKQVFLNDIYVDDSGAVLWRGHNMGDRRTTEIMLNAISKETERLEKEPGTTKKTGVDLATYAGSIRDNAPKGRDLDWQIYASRDGQTLNVDWDITFRRNTTEGAYREFKDQINRANQYLQTVYNDAKSKGYNPTVPNLMTLERARQSDEWAMSNGDSAYSEYEQSLGGNLQISLK
Physico‐chemical
properties
protein length:793 AA
molecular weight: 88307,80260 Da
isoelectric point:8,36969
aromaticity:0,09079
hydropathy:-0,49924

Domains

Domains [InterPro]
DC_0099
STR
1–793
DC_0099
UPU15721.1
1 793
Architecture
STR
STR 1-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPU15721.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 455 455 0,8021
Central domain 456 758 304 0,7900
C-terminal 759 793 34 0,5263
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-455
Central
456-758
C-terminal
759-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STP55
[NCBI] 		2924713 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPU15721.1 [NCBI]
Genbank nucleotide accession
OM688977 [NCBI]
CDS location
range 106829 -> 109210
strand +
CDS
ATGGCCATCCCATCTTTCTTGAACTTTCTTGAAGAGTCTAAACAATTAGACGAAGCGTTTAACTCATCCCCGTATGAATTGACATTCGGCAAGAAGAACGCTGGCGACATTTTCTTCACATTTGTTGATGAAGACGAAAAAGAATTCCGCATCCAATTTTATACCCCGCAGGGGCTGGGCAAGAACGTTCGTCAGGTCTTCATAGGCCAGAAACGTGGTTCGACCTATCCAGACGCAATCGGTCGTTTCAAAAACCCAATGCGTGTCATCGCATCCATGATCGAAGCAACAAAGCAATTCATGGCGACGCCTTTGGGGAAAACCATTGACGGCTTTGCAATTAACTTCTCCAAGAAAGCATTGGAACGTGGTGTTACCCTCCTGCCGAAGATCATCCGTCAGTCCGGCCTGAAGCAGAAGCTCAATGTCATGGACCTGACGTATACCCCTATCCCTGATCGTGCATTCGTATGGGTTGTGCGTAAAGGTAAGGATCCTGCTCAGGTATTCGATGGTCCGAAAATGAAAGGCGTGACTTGGGACGACCCAGACAAAGTCGGTGACGTTCCTGACCAGAAAAATAATCCTGATGTGGGTGTATCATCTTCTGTTGATGATTCCAACGGCTGGAAATTAACTTCAGACGGGAATCAGCCTATGATGATATGGAGTGGTAGAGAGAAAGGTCGCTTAGTCACGGCAAATATCGCCCCTCACTACAATGAGCCTGGTGTGTATGTTGGTGCCTACATGAATGAGAAATCTGTGCGCGGACAAAGTGCTGATTTTATTGCTCGTCAGTTGAAATTACCGCAAGTCCCTATCAGTATCCTGAATGATTTTACCACGGCGTCCACAAAATTCTGGAAAGGTTCTCAACAGAAATCTGCGCCTGTAGATTCCAACACCACAATCGGTGCAACCAGCATCGAACAACTGATCGACAGCGGTTTCGTCGCCCGTGTGTTGGGTATCATTGATACCAACATTGATCAGAAAGCAAGCTACCTCCCAGGAGAAAGCATTAAGAAAATCGGACAGGCGCGTTATCAAACCAAAGGCGGTCTAGTGATCATTGTCAGCTTCGATTCGGTCGACGGTAAGAATCTGAAGTACAGCGTGTTCTCTGAGATCGAAACTCAACCTGGTGTCATCTCTGGTGATGCTCGTCGGGTGGCAAACGAAGTCATGGAAACCATCACATACGTGGCTGAACATCAGTATCGCGGTGAATGGGAAATCAACGCAGTGCCGATGAGCGCTCCATACCCTATCAAGTCCATCCGTCATTCTCAGGGCTGGGGCTATGTAGAGACCGCAAATTGGACTCTGAAAATAGCCGATGCGGTTCTGAATCGCGTGAAACCAGGGAATACCGCTCTGTTGGAACTCAACAAAGAGCCTCTGCGCGGCAAGCACCTTCTGGAAATCATTCCAGAGAAGGGCGACAAGACTCTGATGCTAAAAGATCGCAGCGGAGCCATCTACGGTTCCATTGATCTGAATGCTCAGGGTGCGGATCTGGTCAACTCCGGAACCCTGAAAATCCCGAGCAACGCCATGGTATTTGGTGAGACTGTTAATGGTATGTCTGTCACATGGACTGGCGTCAATTTCCCGAAAGGCGGGAAGTATGACGGCGCGGTGTTGACAACTAATGTGACCTATTACTACGACAAAGGTAAAGTAGCATTCACTCCGATGGTCTCTAACAAAGGTCGCACCCTGAACAATCCGAAAACATATGAACTTCCTTTGAAGAAAGAATTTGTTCAAGGTGTTCTTGATGATACCTCTGACGAGATGAGTATGGTGACGAGGAACATGCAGACCCTCGTCAGCACGAATTACAACCCGAAACAAGTCTTCCTCAATGATATCTACGTGGACGACAGCGGCGCGGTGCTCTGGCGCGGCCACAACATGGGTGATCGCCGTACGACAGAGATCATGCTAAACGCCATAAGCAAAGAAACCGAACGTCTGGAAAAAGAACCAGGGACTACCAAGAAGACGGGTGTCGACCTCGCAACATATGCTGGTTCTATCCGCGACAATGCTCCGAAAGGGCGCGATCTGGATTGGCAGATCTATGCAAGCCGTGATGGTCAAACACTGAACGTGGACTGGGATATCACTTTCCGTCGCAATACGACCGAAGGAGCATATCGTGAATTCAAGGATCAGATCAACCGTGCCAACCAATACCTGCAAACGGTATACAACGACGCGAAATCTAAAGGCTATAATCCTACCGTGCCAAATCTCATGACTCTTGAACGCGCTCGCCAATCCGACGAATGGGCTATGAGTAATGGTGATAGTGCATACAGTGAATATGAACAATCGCTGGGTGGTAATCTTCAGATTAGTCTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5969a2175bb93bcb62b815747e0140d713baab4090a30d4b84a1f240363c53c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3266
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50