Protein

View in Explore
Genbank accession
USL85753.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MADSIKRKFRGADGFDAAGEKIVNVATADRTVLSDGVNVEFLIQENTLQQYDSTRGYTSGFAVIYDNRIWVSNRDIAKPAGNFNELYWTSVRTDAKWRVVSSGTTILKSGEFISVDTAKGNDMIFTLPNNPQDGDTIMLKDIGNKTGTVGVTINASIQDIVLRGPTNKVRSVKMTHPLSQYVFVFSNRLWNLYVSDYERVARIVTPSAVVQAQSNDFIVRRYTSPDPIRVTLPKHANTGDIINFTDLDGKNPQFHMIVSTFDDNTNIGTVGQKSVEVRTSGDGFIVYDESESIWRIWEGDLRPRMRVITDNVTLIPNEVVTVFGVNNSTQKTIDITLPTDIAIGDTVTIAMNYMRKGQKVNIRAATGDKIASSLQLLQFPKRSEYPPDTTWVMNDVLTFDGTTSYVPVLQLSYIEHAGSKYWIVANNDPTVERVDSKDNETRKRLGVIALASQDQANVDHENNPEKELAITPQTLANRVATKVRRGIARLVTLTEIQALTPGPHLDDVIVTPAMLNEKTATETRRGVAETATQAEANGSTDDERIITPKKLHNRIASEILTGILKLVRTTGTLAGIGRDTKGTNVYDYDNNIDAVTPKSLFQFKSTEQAQGGVYLATQNEVIAGGPAQPGFPVVVTPETLHGKTTTDGRIGLIQIAKQTEVDAGTNYNKAVTPKTLNDRKAREDLSGIAEIATQVEFDTGTDDTRIVTPLKVKTRFNSTDRTSVVALSGLVEQGTLWDHYTLDIKEASETQRGTAALATQVQVDAGTDDKTIVTPKKLHAKKATETTEGIIQVANQAETVAGTIANKAVSPKNFKYVVQEEKTWESTIAQRGFVKLSEKALTFKGDTLNGSGRLLPGDLINEPALTDLPKEGYAVSPYEMNRALQYFLPAKAKAVDSDLLDGIDSTQFVRRDIDQVVNGKITFKKDVTLEAPLVSSSTAKFTTVNATISVDIGDTLGNSRINLNTLANGWNIETLANGSTLDFTATDKVLTLNRNGNVTVAQTLTAMNKVDANKGFSVEGGTMVINPSSTEIVIGTQSKQVTLQNKDAKTFSVVDPSGTYTILNTKNAFEITAQGFVKKAGDSMTGPLQIQAPLTVQIPEGRVAPDVKPSDDNPASWSASITSAAIYNKLPGYGVPVMEKDAEGQDTGFVEHYEYVKGPGVLTQHGIGKTAVYQIWAPRPTVQELNHNAQTFWIRNFNIVTGEWDEFGKMYTSVQRPTAGEIGAVSTSGSAFNNLTIRDWLQIKNVRIVPNETTRTVDFIWVDE
Physico‐chemical
properties
protein length:1264 AA
molecular weight: 138223,72870 Da
isoelectric point:5,58428
aromaticity:0,06883
hydropathy:-0,32951

Domains

Domains [InterPro]
DC_1986
ATT
13–136
DC_1986 DC_1209
IPR048391
ATT
1116–1211
IPR048391
USL85753.1
1 1264
Architecture
ATT
STR
ATT
STR
ATT 13-136 | STR 345-1115 | ATT 1116-1211 | STR 1212-1254 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USL85753.1
1 1264
Domain Start End Length (AA) Confidence
N-terminal 1 978 978 0,9207
Central domain 979 1177 200 0,2276
C-terminal 1178 1264 86 0,3106
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-978
Central
979-1177
C-terminal
1178-1264

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage fGh-Ecl01
[NCBI] 		2935060 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USL85753.1 [NCBI]
Genbank nucleotide accession
ON212265 [NCBI]
CDS location
range 154598 -> 158392
strand +
CDS
ATGGCAGATTCAATCAAACGCAAGTTTCGTGGCGCTGACGGCTTCGATGCTGCGGGTGAAAAAATAGTCAACGTTGCTACTGCTGACCGCACGGTGTTATCCGATGGCGTCAACGTTGAATTCCTTATCCAAGAAAACACATTACAACAGTATGATTCTACTCGTGGTTACACTTCTGGTTTCGCAGTAATTTACGACAACCGCATTTGGGTTTCAAATCGTGATATTGCAAAACCTGCTGGCAATTTTAATGAGCTTTACTGGACTTCGGTTCGTACCGACGCAAAATGGCGTGTAGTTTCAAGCGGAACAACAATTTTAAAATCAGGTGAATTTATTTCTGTCGATACCGCAAAAGGTAATGACATGATTTTCACTTTACCAAATAATCCGCAAGATGGTGATACAATTATGCTGAAGGATATCGGTAATAAAACCGGTACAGTTGGTGTAACTATCAACGCATCTATTCAAGACATTGTGTTGCGTGGCCCTACGAATAAAGTTCGCTCAGTCAAAATGACTCATCCACTGTCTCAATATGTGTTTGTGTTCAGCAATAGATTGTGGAATCTTTACGTTTCTGATTACGAACGAGTTGCTCGTATTGTAACACCAAGCGCAGTTGTTCAAGCTCAATCTAACGACTTTATAGTTCGCAGATATACTTCTCCAGACCCAATCCGTGTTACTTTGCCTAAACATGCAAACACTGGAGATATCATCAACTTTACTGACCTTGATGGAAAGAACCCTCAATTCCATATGATTGTTAGTACTTTCGATGATAACACCAATATCGGTACTGTCGGTCAAAAATCTGTAGAAGTTCGTACTTCTGGTGACGGATTCATTGTATATGATGAATCAGAGTCAATCTGGAGAATCTGGGAAGGCGACTTACGTCCGCGCATGCGTGTGATCACCGACAACGTAACTTTAATTCCAAACGAGGTTGTTACTGTTTTTGGTGTAAATAACAGCACTCAGAAAACTATTGATATAACTTTACCTACTGATATTGCTATTGGCGATACTGTCACTATTGCAATGAATTATATGCGCAAAGGACAGAAAGTAAATATCAGAGCAGCTACTGGAGATAAAATTGCTTCAAGTCTTCAATTACTGCAATTCCCTAAACGCTCAGAGTATCCGCCTGATACCACTTGGGTAATGAATGATGTTCTTACTTTTGATGGTACTACTTCTTATGTTCCAGTATTGCAATTATCTTATATTGAACATGCTGGAAGTAAATACTGGATTGTTGCTAATAATGATCCGACCGTAGAGCGTGTTGACTCTAAAGATAACGAAACTCGTAAACGCTTAGGTGTTATTGCATTAGCAAGTCAAGACCAGGCAAACGTTGACCACGAAAATAATCCAGAAAAAGAGTTAGCAATTACTCCTCAAACTCTGGCAAACCGTGTTGCTACTAAAGTTCGTCGCGGTATTGCTCGTTTAGTTACTTTAACTGAAATCCAAGCTCTAACTCCTGGGCCGCATTTGGATGATGTTATTGTCACTCCTGCGATGCTGAATGAAAAAACAGCAACAGAAACTCGTCGCGGTGTTGCTGAAACTGCTACTCAAGCTGAAGCAAATGGTTCAACAGACGATGAACGTATCATCACTCCGAAGAAGCTGCATAACCGTATTGCTTCTGAGATTTTGACTGGTATTCTTAAATTAGTCAGAACGACTGGAACTCTTGCGGGTATTGGACGTGATACTAAAGGTACTAACGTTTATGATTATGATAACAACATTGATGCGGTAACTCCAAAATCATTGTTCCAATTCAAGTCTACTGAGCAAGCTCAGGGCGGTGTTTATCTTGCTACTCAAAATGAAGTAATTGCCGGTGGTCCGGCACAGCCTGGTTTCCCTGTTGTAGTTACTCCTGAAACTCTTCATGGTAAAACAACTACTGACGGAAGAATTGGTCTTATTCAGATTGCTAAACAAACTGAAGTAGATGCTGGTACTAATTACAATAAAGCTGTTACTCCTAAAACTCTGAATGACCGTAAGGCTCGTGAAGATTTAAGTGGTATTGCTGAAATTGCAACTCAAGTTGAATTTGATACCGGAACGGACGATACACGTATAGTAACTCCATTAAAGGTTAAAACTCGTTTCAATTCAACCGATAGAACATCTGTTGTTGCTCTGTCTGGATTAGTTGAGCAAGGAACCTTGTGGGACCATTATACATTAGATATCAAAGAAGCATCTGAGACTCAGCGTGGTACTGCTGCTCTGGCCACTCAGGTACAAGTTGATGCTGGTACTGATGATAAGACGATTGTTACGCCTAAGAAATTGCATGCTAAGAAAGCTACTGAAACTACCGAAGGTATTATTCAAGTTGCTAACCAAGCCGAAACAGTAGCCGGTACTATTGCTAATAAAGCAGTTTCTCCTAAGAACTTTAAGTATGTTGTCCAAGAAGAAAAAACTTGGGAATCTACTATAGCTCAGCGTGGTTTCGTTAAATTGTCAGAAAAAGCATTAACGTTTAAGGGTGATACTTTAAATGGTTCTGGTCGTCTGCTTCCAGGTGATTTAATTAACGAACCCGCTTTAACAGATTTGCCTAAAGAAGGTTATGCAGTATCTCCATACGAGATGAACCGTGCTCTGCAATACTTCTTACCTGCTAAAGCAAAAGCTGTTGATTCGGATTTACTGGATGGAATTGATTCAACTCAGTTTGTCCGCCGCGATATCGACCAAGTAGTTAATGGCAAAATTACATTCAAAAAGGATGTTACTCTAGAAGCTCCTCTGGTGTCATCTAGTACGGCCAAATTCACTACCGTGAATGCTACTATATCTGTTGATATTGGTGACACCTTGGGTAATTCTAGAATCAATTTGAATACTCTGGCGAATGGCTGGAACATTGAAACGCTGGCGAATGGTTCAACTCTTGATTTTACTGCTACAGATAAAGTTCTGACGCTTAATCGTAACGGAAACGTAACGGTTGCTCAGACTCTGACAGCAATGAACAAAGTTGACGCTAATAAGGGCTTTTCAGTTGAAGGTGGTACAATGGTTATCAATCCTTCCTCTACTGAAATTGTCATTGGTACTCAATCTAAGCAAGTAACATTGCAGAACAAAGATGCTAAGACATTCTCAGTTGTAGACCCTTCTGGCACTTACACCATTCTGAATACCAAGAATGCTTTTGAAATAACGGCTCAAGGGTTCGTTAAGAAAGCAGGTGATTCAATGACTGGGCCACTTCAAATTCAAGCTCCATTGACTGTTCAGATTCCTGAAGGACGAGTTGCTCCTGATGTTAAACCATCAGATGATAACCCAGCTTCATGGTCTGCATCAATTACGTCAGCAGCAATTTACAACAAATTGCCTGGCTATGGTGTTCCAGTTATGGAAAAAGATGCTGAAGGACAAGACACCGGTTTCGTAGAACATTACGAATATGTTAAAGGTCCTGGTGTATTAACTCAGCATGGTATTGGTAAGACTGCGGTCTATCAAATTTGGGCGCCTCGCCCAACTGTGCAAGAGTTAAACCACAATGCTCAGACTTTCTGGATTCGTAACTTCAACATCGTCACTGGCGAGTGGGACGAATTTGGTAAGATGTACACCTCAGTTCAGAGACCTACTGCAGGGGAAATTGGTGCTGTATCAACTTCTGGTTCAGCTTTCAATAACTTGACAATTCGCGATTGGTTACAGATTAAGAACGTTCGTATTGTTCCTAATGAAACTACTCGCACTGTTGACTTCATATGGGTTGATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fdad28f06b17b20166ed363f8f6c134b3bf565c2dc68ade2f010622023e1d51c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel Enterobacter cloacae bacteriophages for therapeutic use Lyytinen,O.L., Dapuliga,C.C., Wallinger,D., Patpatia,S., Audu,B.J. and Kiljunen,S.J. 2024-07-05 — GenBank