Protein

View in Explore
Genbank accession
WMU95136.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKNYEIKNHTIEVDFSNYRINKRLLDYFIYNENDVKTAYIEAILKNKDEIIDLSEYDRVLVSITKSDGQKVNGECEVVDAENGIVEIELSRQALASVGINTFQLSLVKDGTLLNTTNLYYRVEEGMINDDDITSTDEYGVLLVIIAQAEEIIKNNKELTKRVEQLEITILGNEEVRDKAEQIRIYNEDIRNIQEEEREFNELTRQNQEANREESIQNMQIQVDDKLTDCQLQLDEMIDAKSKEIDNIVDDKMLDVQVQTDKKFQDLDTRANNTFDLYDKTFEDKLTDNQEQIDYKLDEVNQAISNVEDCIDESTTKLDTKIKEVDDKIVEVNTAKTDMTTTVSNKITEFENRFEELESLDARGELIQARESVDGTVKDTLKDRLTYDFEKVNEKIAEMTSAATNVAFSKSYVESDWVADGEYFKLIVNHNLVTENIFVAILDEATKKSMTNSYTTVDSNTIEIFNESNIDVKVTVVNGNTNKEVIQATINDNITTLDSTYSSIKIDAKFDESLTKINENKSNIATNLEKINLIQSKVGSSELSTVSKNISDAVNELDASVKVLESGGNTNEQLKILKENYNKMSVEILKILFELELDKEATADEAGYWYDTLYDSKNISNLDGLKLNKFKQQLELLSNSGTVLFKNVTVPFLCNKIRYIHDLGSNYSETKTEESYQKGDTEIKINKYSYEVR
Physico‐chemical
properties
protein length:692 AA
molecular weight: 79202,14580 Da
isoelectric point:4,45927
aromaticity:0,06792
hydropathy:-0,59971

Domains

Domains [InterPro]
DC_1249
STR
4–293
DC_1249
G3DSA:2.60.40.3350
ATT
6–128
G3DSA:2.60.40.3350 Coil Coil
DC_0125
ATT
211–494
DC_0125
WMU95136.1
1 692
Architecture
ATT
STR
ATT
ATT 4-128 | STR 129-210 | ATT 211-494 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridioides phage AR1086-1
[NCBI] 		3068253 No lineage information
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMU95136.1 [NCBI]
Genbank nucleotide accession
OR397124.1 [NCBI]
CDS location
range 43608 -> 45686
strand +
CDS
TTGAAAAATTATGAAATAAAGAATCATACCATAGAGGTCGACTTTAGTAATTATAGAATAAACAAAAGATTGCTAGATTATTTTATTTATAATGAAAATGATGTTAAAACAGCTTATATTGAAGCTATATTGAAAAATAAAGATGAAATAATAGATTTATCTGAATATGATAGAGTTTTAGTTAGCATTACAAAAAGTGATGGACAAAAGGTTAATGGTGAATGTGAAGTTGTAGATGCAGAAAATGGTATTGTAGAGATAGAACTTAGCCGACAAGCACTTGCTTCTGTTGGTATAAATACATTTCAACTATCCCTTGTGAAAGATGGAACTTTACTCAATACTACAAATCTTTATTATAGAGTTGAAGAGGGTATGATTAATGATGATGATATCACCTCAACTGATGAATATGGAGTATTATTGGTAATAATAGCCCAAGCAGAAGAGATTATAAAAAATAATAAAGAGTTGACTAAAAGAGTTGAACAGCTTGAAATAACTATACTTGGAAATGAAGAAGTTAGGGATAAAGCAGAGCAGATTAGGATTTATAATGAAGATATAAGAAACATACAAGAAGAAGAAAGAGAGTTTAATGAGTTAACACGTCAAAATCAAGAGGCAAATCGTGAAGAATCCATTCAGAATATGCAAATTCAAGTTGATGATAAACTTACAGATTGCCAACTCCAATTAGATGAAATGATAGATGCTAAGTCTAAAGAAATAGATAATATAGTCGATGATAAAATGCTTGATGTTCAAGTTCAGACAGACAAGAAGTTTCAAGACTTAGACACTAGAGCTAATAATACTTTTGATTTGTATGATAAGACATTTGAAGATAAACTTACAGATAACCAAGAGCAAATTGATTACAAACTTGATGAAGTAAATCAAGCTATATCTAATGTAGAAGATTGTATTGATGAAAGTACTACAAAATTAGATACAAAGATAAAAGAAGTAGATGACAAAATAGTTGAAGTAAATACTGCTAAAACTGATATGACAACAACTGTTAGTAATAAAATAACTGAATTTGAAAATAGGTTTGAAGAATTAGAAAGTCTTGATGCTAGAGGCGAATTAATACAAGCTAGAGAAAGTGTTGATGGAACTGTAAAGGATACTTTAAAGGATAGATTAACATATGACTTTGAGAAAGTTAACGAGAAAATAGCAGAAATGACTTCTGCTGCAACTAATGTAGCTTTTAGTAAATCTTATGTTGAATCGGATTGGGTTGCTGATGGAGAATATTTTAAACTTATAGTTAATCATAATTTAGTTACAGAAAATATATTTGTAGCAATATTAGATGAAGCAACTAAGAAAAGTATGACTAATTCTTATACTACAGTAGATTCTAATACGATAGAAATATTTAATGAAAGTAACATAGATGTAAAAGTAACTGTTGTAAATGGTAATACAAATAAAGAAGTTATACAAGCTACAATAAATGATAATATAACAACACTAGATAGTACTTACTCTAGTATTAAAATTGATGCAAAATTTGATGAGAGTCTAACTAAGATAAATGAAAATAAAAGTAATATAGCTACTAACTTAGAGAAAATAAATCTAATACAAAGTAAAGTTGGTTCGAGTGAATTAAGTACAGTATCTAAAAATATATCAGATGCGGTAAATGAATTAGATGCTAGTGTTAAAGTTCTTGAATCTGGTGGAAATACAAACGAGCAATTGAAAATATTAAAAGAAAATTATAATAAAATGTCTGTGGAAATACTTAAAATTCTATTTGAATTAGAATTAGATAAGGAAGCTACAGCAGATGAAGCTGGGTATTGGTATGATACCCTATATGATTCTAAAAACATAAGTAATTTAGATGGTTTAAAGCTTAATAAATTTAAGCAACAATTAGAGTTACTTTCAAATAGTGGAACTGTATTATTTAAAAATGTAACAGTTCCTTTTTTATGCAACAAAATAAGATATATTCATGATTTAGGAAGCAACTATAGTGAAACTAAAACAGAAGAATCTTATCAAAAAGGTGATACTGAAATAAAAATAAACAAGTATTCCTACGAAGTGAGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
01a5abe79152f9183ff56302cd9e223e508d37b139cfbba645c5c3c925d71103
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6524
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Cdiff phage discovered during analysis of top 10 ribotypes AR-1086 Adamczyk,M., Gargis,A. and Vlachos,N. 2024-07-18 — GenBank