Protein

View in Explore
Genbank accession
QBX25009.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MFNVMTVEEDEKKIKCYCENLNLELINEYSNAYEADRAMTFVEYCNAMDLLNMTKLSIGINEISDYKRTLKWEGQDTKLARLISLANKFDAEIDFETFLNADSTIKSFLVNVYHENDGNYHGVGRVRKDITLVYGKNLKSIKRKIDKTGIFNMTVPSSSDTVEDETVDTGESSAKTVVTKNADGSVTKTTTKKASDGTTVQTKVTTKVVDRADGSRVTTVRTEKSNGLITEKVITRDANGNTDTQTKTIREATSETAETVDEYITLSGLPDWEIKNDSGVVEFYKRGEALYAPISAQLYPSTFTSDTQGDQWIRRDLTFDVETDTQLQTEALKQLKAAAYPELTYEFDGYIDADIGDTVQISDSGFTNMLLLEARIFEQKLSFSSKKNWKTTLGNFKALQNMLSSDIQGELEKLVDDAKPYTIRVSSDNGITFKNGEGKSLIKATLWKGNKVLNTDVTWRWALDGNVTVAMQYLAKASTIKDTAVLTVSAYVGNNEVATTEITLTNVNDGADGAKGDKGDDGAKGDKGETGNGIANTVITYGLSTSETTEPTTWASNMPVLVKGMYLWTRTVQIYTNGTSSTSYQKGYIAKDGAQGLPGTPGKDAQTQYTHIAYADNATGGGFSLTDNTKAYWGMYQDFNAANSNDPTKYKWSKWKGDQGLPGAPGTDGKTPYIHFAYADDNKGTNLSFTDKNQQYMGYYSDYTEANSTDYKKYTWVDRLANVKGGSRNYFKNSLTKTFYTTDAQTFDWRTYIVDAFWKNKDRLKKNFVKISFDITFPVALENDYTANIHFSATPWYSNRVTFKAGTTSRQHFEFGIDLSSASEDYHTDNVFIRFGTNYGFPSDFKIILENMMLSIGSYYPDYIQAIEDTQEQIDSKADSALTQEQLNALEAKRLQMEVELKAKATLEQVSELETFINNLKQEDTNGRQKIIEITKAIEERVKDIEPIMEYSQKLQFMDTYITQGNGGMVIGLNESTTKVVVTPDRISFQSGGSEVAYISQRMLHIDNGVFTMSLQLGHYITRAHPKNEYINATYFVK
Physico‐chemical
properties
protein length:1038 AA
molecular weight: 116216,06680 Da
isoelectric point:5,09081
aromaticity:0,10405
hydropathy:-0,55925

Domains

Domains [InterPro]
DC_0109
STR
1–1038
DC_0109
IPR011098
STR
141–224
IPR011098 Coil Coil
QBX25009.1
1 1038
Architecture
STR
STR 1-1038
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan224
[NCBI] 		2548054 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus gallolyticus
[NCBI] 		315405 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25009.1 [NCBI]
Genbank nucleotide accession
MK448878.1 [NCBI]
CDS location
range 29016 -> 32132
strand +
CDS
TTGTTTAACGTGATGACTGTTGAAGAAGATGAAAAGAAAATCAAATGCTACTGTGAGAATTTGAATTTAGAGCTCATTAATGAGTATTCAAACGCATATGAAGCTGACAGAGCAATGACATTCGTTGAATATTGCAATGCTATGGACTTGCTCAATATGACTAAGCTCTCAATCGGTATTAATGAAATCTCTGACTACAAACGAACTTTGAAATGGGAGGGGCAAGATACCAAACTTGCTCGTCTGATTTCATTAGCTAATAAATTCGATGCAGAAATTGATTTTGAAACATTCTTGAACGCTGACAGCACTATCAAATCGTTTCTTGTCAATGTTTATCACGAAAACGATGGTAATTATCACGGCGTGGGACGTGTCAGAAAAGATATTACTTTGGTTTATGGTAAGAACCTTAAATCTATCAAACGTAAGATTGATAAGACTGGTATTTTCAACATGACCGTTCCATCAAGTTCGGACACGGTTGAAGATGAAACAGTTGATACAGGAGAGTCAAGTGCTAAGACGGTTGTCACAAAGAATGCTGATGGTTCGGTGACTAAAACGACAACTAAGAAAGCTAGTGATGGCACGACTGTACAGACCAAAGTCACAACCAAAGTCGTGGATAGGGCTGACGGCTCACGAGTGACAACAGTACGTACCGAGAAATCAAACGGGCTTATCACAGAAAAAGTAATCACAAGAGATGCAAACGGCAATACTGACACGCAAACTAAGACGATTAGAGAAGCAACGTCAGAAACCGCTGAAACTGTCGATGAATACATCACTTTGTCTGGTTTACCAGACTGGGAAATTAAAAATGATAGTGGTGTGGTTGAGTTCTATAAGCGAGGTGAAGCACTATACGCTCCTATCTCTGCTCAATTATATCCCTCGACTTTCACTAGCGACACGCAAGGTGACCAATGGATTAGACGTGATTTAACCTTTGACGTTGAAACGGACACGCAACTCCAAACCGAAGCCTTGAAGCAACTGAAAGCAGCTGCTTATCCCGAGTTAACTTATGAATTCGATGGCTACATTGATGCCGACATTGGCGACACCGTTCAAATTTCAGATAGTGGCTTTACTAATATGTTATTGCTTGAAGCACGTATTTTTGAGCAAAAACTAAGCTTCTCTAGCAAGAAGAACTGGAAAACCACTCTTGGGAACTTTAAAGCTCTCCAAAACATGCTTTCTAGCGACATTCAAGGCGAACTTGAAAAACTAGTGGATGATGCGAAGCCATATACTATCCGTGTTTCGAGCGATAACGGTATTACCTTTAAAAACGGAGAGGGGAAAAGTCTTATCAAGGCTACTCTCTGGAAAGGCAATAAAGTGTTAAACACCGATGTCACTTGGCGCTGGGCGCTTGACGGAAACGTTACTGTCGCTATGCAGTACCTTGCTAAAGCTAGCACTATCAAAGATACTGCTGTTTTGACCGTCTCCGCTTATGTCGGTAACAACGAAGTTGCAACGACTGAAATCACTCTGACTAATGTCAACGATGGCGCTGACGGTGCTAAAGGCGATAAGGGTGATGATGGAGCTAAAGGTGATAAGGGCGAGACCGGAAACGGTATTGCTAATACTGTTATCACGTATGGTCTCAGCACGTCCGAAACCACCGAACCAACCACATGGGCTAGTAACATGCCTGTTTTAGTCAAAGGTATGTATTTGTGGACGCGAACCGTACAAATATACACCAATGGTACATCTAGCACTAGCTATCAAAAAGGTTATATTGCCAAAGACGGTGCGCAAGGTTTGCCGGGTACGCCGGGGAAAGATGCTCAAACGCAGTACACACATATTGCGTATGCCGACAACGCAACCGGTGGTGGTTTTAGTCTAACAGATAACACCAAAGCTTACTGGGGCATGTACCAAGATTTTAATGCTGCCAACAGCAACGACCCAACCAAATACAAGTGGAGCAAGTGGAAAGGCGACCAAGGATTGCCCGGCGCACCGGGAACTGATGGTAAAACACCTTACATTCACTTTGCTTATGCTGATGACAATAAAGGTACTAACCTTAGCTTTACCGATAAAAATCAGCAATATATGGGCTACTACAGCGACTACACAGAAGCTAATAGCACCGACTACAAGAAATACACTTGGGTGGATAGGTTGGCGAATGTTAAAGGGGGTTCTCGTAACTATTTTAAAAACTCTTTAACTAAAACTTTCTATACAACAGATGCGCAGACATTCGACTGGAGAACATATATAGTTGATGCTTTTTGGAAAAACAAAGACAGGCTTAAAAAGAATTTTGTAAAAATATCATTCGATATTACTTTTCCTGTTGCATTGGAAAATGATTACACAGCTAATATTCATTTCTCGGCAACTCCGTGGTACTCAAATAGAGTTACATTCAAAGCGGGTACGACAAGCAGACAGCATTTTGAATTTGGAATTGATTTATCAAGTGCAAGCGAGGATTACCACACAGATAATGTGTTCATACGTTTTGGAACAAATTATGGTTTTCCTAGCGACTTTAAAATCATTCTCGAAAATATGATGTTGTCAATTGGTTCTTACTATCCAGATTATATTCAAGCTATCGAAGACACCCAAGAACAAATCGACAGCAAAGCCGACAGCGCACTCACGCAAGAGCAGTTGAATGCGTTAGAAGCTAAGCGATTGCAGATGGAAGTTGAGCTAAAAGCAAAAGCTACTTTGGAACAAGTATCAGAGCTTGAAACGTTTATCAACAATCTTAAACAAGAGGACACAAACGGTCGTCAAAAGATTATTGAGATAACAAAAGCCATTGAAGAACGTGTCAAAGACATTGAGCCGATTATGGAATACTCTCAAAAGTTGCAGTTCATGGATACGTACATTACGCAAGGAAATGGCGGAATGGTTATTGGTTTGAATGAGAGTACGACTAAAGTCGTTGTCACGCCAGACCGCATTTCATTCCAAAGTGGTGGTTCAGAAGTAGCTTACATCAGTCAAAGAATGCTCCACATTGATAATGGTGTATTTACGATGTCTTTACAATTGGGACATTACATCACTCGTGCTCATCCAAAAAATGAGTATATCAATGCGACATACTTTGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c34a86aafa4b5ddc81e1802d4cfc749bf2eb5bb6775cde045c282a61f6a5c850
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3067
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank