Protein

View in Explore
Genbank accession
XGU08436.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MKKILDSAREYLRTNNKIKTACLITLELPSSTGSSSAYIYLTDYFRDVVYSGILYRSGKVKSITTHKQNRDLSVGSLSFTITGTAEDEVLKLVQNGVSFLDRTISIHQAVIDEDGNILPVDPETNGPLLYFRGKITGGGIKDNVGTSGISTSVITWNCSNQFYDFDRVNGRYTDDADHRGLEIVAGELVPSNGAKRPEYQEDYGFFHSNKSVSFLAKYQVQEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFLPVVYGVQKIPGLPVFADTELHNPNIVYVVYAFCEGEIDGFLDFYFGDVPMICIDPNDSTARTCFGTKKTAGDTMQRIATGMAASEPSVHGQEYKYNDGNGDIRIWTFHGKSDQSAAEVLVNIAKEKGFYLQNNYGNGPEYWDERYKLLDTAYAVVRFTINENRTEIPEVSAEVQGKKVKIYHSDGSVTSNATSLNGIWQTLDYLTSDRYGANITIDQFPLTQLIQEAAILDIVDESYQQSWQPYWRYTGWTDMSKENRQIVQMNTIVDTAESVFKNVQGLLESYGGAINNLSGQYRITVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASILDPALSWKTNSITFFNSVFKEQDKGLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYHFIGIEPNDPIAFTYDRYGWEKKYFLVDEVENSREGKINITLQEYGEDVFINSEQVDNSGNDIPDVSNNVLPPRDFIYTPTPGGQVGSIGKNGELSWLPSLTNNVVYYSIVHSGHADPYIVQQLETNPNARMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSVELNSAKNLSVVNNFRVTNTATGDASEFVGPDVKLAWDRIPEEDIIDGIYYTLEIYDNLDRMLRSIRIEDQYVYDYLLIYNKADYALLNEDALGINRKLRFRIRAEGDNGEQSVDWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107210,40360 Da
isoelectric point:4,94689
aromaticity:0,11486
hydropathy:-0,42139

Domains

Domains [InterPro]
DC_0187
STR
230–948
DC_0187
IPR032876
ATT
594–697
IPR032876
XGU08436.1
1 949
Architecture
STR
ATT
STR
STR 230-593 | ATT 594-697 | STR 698-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGU08436.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,9509
Central domain 312 541 231 0,4326
C-terminal 542 949 407 0,0058
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-541
C-terminal
542-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen_SG_WM_RUS_R2
[NCBI] 		3234146 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGU08436.1 [NCBI]
Genbank nucleotide accession
PQ002169.2 [NCBI]
CDS location
range 2942 -> 5791
strand -
CDS
ATGAAGAAAATTCTTGACAGTGCAAGAGAGTATTTAAGAACCAATAATAAAATAAAAACTGCATGTCTTATTACTCTTGAATTGCCAAGCTCTACCGGATCAAGTTCTGCGTACATTTATCTTACAGACTATTTTAGGGATGTGGTATATAGTGGTATCTTATATAGATCCGGTAAAGTTAAGTCTATAACAACACATAAACAAAATAGAGATCTTTCCGTAGGTAGCCTTTCTTTTACTATTACTGGTACAGCTGAGGATGAAGTTTTAAAACTAGTTCAAAATGGTGTATCCTTCTTAGATAGAACTATCTCAATTCATCAGGCTGTCATCGATGAGGATGGCAATATTCTTCCAGTAGATCCAGAAACTAATGGACCTCTTCTATATTTCCGTGGTAAAATCACGGGAGGAGGTATTAAAGATAACGTTGGTACTTCAGGTATTAGCACTTCTGTTATTACATGGAACTGTTCAAACCAGTTCTATGACTTTGATAGAGTTAACGGTAGATACACTGATGATGCGGACCATCGTGGTTTAGAGATTGTTGCAGGTGAATTAGTACCTTCTAATGGTGCTAAACGCCCTGAATATCAGGAGGACTACGGATTTTTTCACTCTAACAAGAGTGTCTCTTTTCTAGCTAAGTATCAGGTACAGGAGGAAAGATATAAATTACAATCCAAGAAGAAATTATTTGGCCTGTCTAGAAGCTATAGTCTTAAGAAATATTATGAGACTGTAACTAAAGAGGTTGATTTAGACTTTAACCTTGCTGCTAAGTTTCTTCCAGTGGTTTATGGGGTTCAGAAAATTCCTGGATTACCTGTATTCGCTGATACAGAGCTACACAACCCTAACATCGTATACGTTGTATACGCATTCTGTGAGGGCGAGATTGATGGATTCCTGGACTTCTACTTCGGTGATGTTCCTATGATTTGTATCGATCCTAATGATAGTACAGCCCGTACTTGTTTTGGTACTAAGAAAACAGCGGGTGATACTATGCAACGTATTGCTACTGGTATGGCAGCATCTGAACCCTCAGTACACGGTCAGGAGTATAAGTATAATGATGGTAATGGCGATATCAGAATCTGGACATTCCACGGTAAATCTGATCAATCTGCTGCCGAAGTACTGGTAAACATTGCTAAGGAAAAAGGATTCTACCTACAGAACAATTACGGTAATGGCCCGGAATATTGGGATGAACGTTACAAACTCCTAGATACTGCATATGCTGTTGTTCGTTTCACTATTAATGAAAATAGAACGGAAATACCTGAAGTTAGCGCTGAAGTTCAAGGTAAGAAGGTTAAAATCTATCACTCAGATGGTAGTGTTACTTCAAATGCTACTAGCCTAAATGGTATATGGCAAACTTTGGACTATCTAACATCTGATCGTTATGGTGCAAACATCACAATTGATCAGTTCCCTTTAACTCAGTTAATTCAGGAAGCAGCCATTTTGGATATAGTTGATGAATCCTATCAGCAATCCTGGCAACCATACTGGAGATATACTGGCTGGACTGACATGTCTAAGGAAAATAGACAAATAGTTCAGATGAACACCATTGTTGATACTGCTGAGTCTGTCTTTAAAAACGTACAAGGACTACTTGAGTCTTACGGTGGAGCAATTAACAACTTATCTGGCCAATACAGAATAACAGTTGAAAAGTACTCCAATACACCTCTTGAGATTAATTTCTTGGACACATATGGGGACTTAGAATTATCCGATACGACTGGCAGAAACAAGTTTAACTCAGTTCAGGCTTCTATCTTAGATCCTGCGTTAAGCTGGAAAACAAACTCTATTACCTTCTTTAACTCAGTATTTAAAGAACAGGACAAGGGTTTAGACAAGAAGTTACAACTATCCTTTGCAAATATTACCAACTACTACACTGCACGTAGTTTTGCTGATAGGGAACTGAAGAAGTCCCGTTACTCCAGAACTTTATCATTCTCACTACCATATCACTTTATTGGTATTGAGCCTAACGATCCTATTGCTTTTACATACGATCGTTATGGGTGGGAGAAGAAATACTTCCTAGTTGATGAAGTTGAAAACTCTAGAGAAGGAAAGATTAATATTACTCTTCAAGAGTATGGGGAAGATGTTTTTATTAACTCAGAGCAGGTTGATAATAGTGGTAATGATATTCCTGACGTAAGCAATAACGTACTACCTCCGAGAGATTTTATCTATACACCTACTCCAGGTGGTCAGGTTGGGTCTATCGGTAAGAATGGTGAATTGTCTTGGCTTCCTAGTCTGACAAATAACGTTGTTTACTACTCTATTGTTCATTCTGGACACGCTGACCCTTATATAGTACAGCAATTGGAAACTAATCCAAATGCTCGAATGATACAGGAAATCATTGGAGAACCTGCAGGGCTAGCAATCTTTGAGATTAGAGCAGTAGATATTAATGGTAGACGAAGTTCTCCGGTGACCTTATCAGTAGAGCTGAACTCTGCTAAAAACTTGAGCGTTGTTAATAACTTTAGGGTTACTAATACAGCTACAGGAGATGCATCGGAATTTGTAGGACCAGATGTCAAATTAGCCTGGGATAGAATTCCAGAAGAAGATATTATTGATGGAATCTATTATACTCTCGAAATCTATGATAATCTAGATCGTATGTTGAGAAGTATAAGGATAGAGGATCAATATGTCTATGATTATCTACTGATATACAACAAGGCAGACTATGCTTTGCTAAACGAAGATGCTCTAGGTATTAATAGGAAGTTACGTTTCCGAATTAGAGCAGAAGGTGATAATGGCGAGCAATCTGTGGATTGGGCATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40dcf72809a66d6e98cf5abe21f9df8f17ca07f1f64f5ae4aa4fba899ef2b0d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8264
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50