Protein

View in Explore
Genbank accession
YP_009190428.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,65
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MADQFKPAFRATSGLDAAGEKVVNVAKADFGTLTDGVNVDFFIEENTLQQYDSTRGYRQNFAVIYDNRVWVSNQDIPAPAGAFAELRWKAVRTDPKWVEIKQPVYQLKSGDYVTVNSEQSPCNMSLPSSPQDGDTIVIKDIGNNAGYNEMKVRATNQSIVRFGQQVTETLLTKPLSYNILIFSNRLWNFYQTAQEERGIRVEPLVEFKAQAGDSIFRRYTSANPVTILLPKYANQGDIIKSVDIDGLGPMYHLIIKSSDPTIGIDSPGVLQKEYRTSGDGLLTYVAADRVWKTWDGDIRTRLRIVRDNVKLMPNESITVFGDNNMVSQTINIELPTDVSIGDTIKIALNYLRKQQTVILKTTGGDKIATDIKLLQFPKRSEYPPDATWVTVSQLEFNGDINYTPVIEFSYTEEAGAGVWIVQQNVPTVERVDSKDNNTRKRLGVISLASQTEANVDFENAPIKESAITPETLANRVATESRRGIARIATTAQVNQDTTFAFQDDLIISPKKLNERTATETRRGLAEIATQTETNQGTDDSTIITPLKLTARKASETLTGIAKLVSTVGTAPGVDRPTLGTNVYNSANNIDIVTPMSLSQLKGTYTEQGLWIGAIESEVIAGVMNNGFPNGVVTPEMLHKKTSTDSRIGLIQIAKQAEVDAGTDYTKAVTPKTLNDRKASETLTGIAEIATQAELDGGTDDVRISTPLKIKTHFADTTRREVTAASGLEVTGTVWDKISFNIKPSAEAQRGTARLATQGEVDTGTDDATIVTPLKLQRKKATEGTEGIIQVATQAEVIAGTNGLKAVPPVHLKYIAQTEKTWEATAARRGFVKLTENTLTFKGDAVNGSGRLLPDGSANLPALDGLMKDGFAVSPYEMNRALQYFLPANAKAVDTDKLDGLDSLQFIRRDVDQSVEGKLTLTKETILTAPLTSSTYASFAGTLSAKDIATEGPIIILNGTNRWNIRALNNGTTLTFGNTANVLTINSATGNVAAQNNLSAGAEVSATTKYNLNSRTVIETTAGTPNATLAVGDNAQNLVLKTLDAGNIVANGGGAYKVLTEKNAKEIVDRDFVKKEGDTMGGKLNINAPVLPKITEAQALAPLNTNNFGFWTADITTPTEYQKLPGYAVPVMEIIDGSSTGHVDHYDYVKAPGVMTGTGTSLTSMTRTWTPRPQSVQDNHNANTIWISVWDLARNKWGEWGRVYTNQAPPTAAEIGAVSSSGSAFNNLTIRDWLQVGQVRIEPDPDTRSVKFTWVDIP
Physico‐chemical
properties
protein length:1257 AA
molecular weight: 136636,93800 Da
isoelectric point:5,37352
aromaticity:0,06762
hydropathy:-0,32148

Domains

Domains [InterPro]
DC_1946
ATT
1–206
DC_1946 DC_1209
IPR048391
ATT
1106–1203
IPR048391
YP_009190428.1
1 1257
Architecture
ATT
STR
ATT
STR
ATT 1-206 | STR 342-1105 | ATT 1106-1203 | STR 1204-1241 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage PEi20
[NCBI] 		1608310 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kanagawavirus
Host Edwardsiella ictaluri
[NCBI] 		67780 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009190428.1 [NCBI]
Genbank nucleotide accession
NC_028683 [NCBI]
CDS location
range 157597 -> 161370
strand +
CDS
ATGGCCGATCAATTTAAACCTGCATTCCGTGCCACGTCTGGTCTCGATGCAGCAGGCGAAAAGGTTGTCAACGTTGCCAAAGCCGACTTCGGTACATTAACTGACGGTGTTAACGTTGACTTTTTCATCGAAGAAAACACTCTTCAACAGTATGATTCGACTCGTGGTTATCGCCAGAACTTCGCAGTTATCTATGATAACCGTGTTTGGGTCTCTAACCAGGATATTCCTGCACCTGCTGGCGCATTCGCAGAACTTCGTTGGAAAGCAGTTCGTACCGATCCAAAATGGGTCGAAATCAAACAACCTGTTTACCAACTCAAATCAGGTGATTATGTAACTGTTAACTCAGAACAATCACCGTGCAATATGTCTTTACCATCGTCTCCACAGGATGGCGATACCATCGTTATTAAAGATATCGGTAATAATGCCGGTTATAACGAAATGAAAGTACGTGCGACTAACCAATCAATTGTTCGTTTTGGTCAGCAAGTAACTGAAACTCTTTTAACCAAGCCACTGAGCTATAATATTCTTATTTTTAGTAATCGTCTGTGGAACTTCTACCAGACTGCTCAAGAAGAACGTGGTATTCGTGTAGAACCTTTAGTAGAATTCAAGGCTCAAGCCGGTGATTCAATTTTCCGTCGTTATACTTCAGCAAACCCGGTTACTATTCTTCTGCCAAAATACGCTAACCAAGGCGACATTATTAAGTCTGTTGATATTGACGGCTTAGGTCCGATGTACCACCTGATTATCAAATCAAGTGACCCGACCATCGGTATCGATTCTCCTGGTGTTTTACAGAAAGAATATCGTACGAGCGGTGATGGACTGCTTACTTATGTTGCAGCCGATCGTGTCTGGAAAACTTGGGACGGTGATATTCGTACACGTCTTCGTATTGTTCGTGATAACGTTAAGCTTATGCCTAATGAAAGTATCACGGTATTCGGCGACAATAATATGGTTTCTCAGACAATCAATATTGAACTGCCTACCGATGTTTCTATCGGTGACACAATCAAGATTGCTCTGAACTATCTTCGTAAACAACAGACTGTTATTCTGAAAACGACTGGTGGTGATAAGATTGCAACTGATATTAAGTTGCTTCAGTTCCCTAAACGTTCTGAATATCCGCCTGATGCTACTTGGGTAACTGTATCTCAGTTAGAATTTAATGGTGATATTAACTACACCCCGGTAATCGAGTTTAGTTATACGGAAGAGGCTGGTGCAGGTGTTTGGATTGTTCAACAGAACGTTCCAACCGTCGAACGTGTCGATTCTAAAGATAATAACACTCGTAAACGTCTTGGTGTTATTTCACTGGCAAGCCAGACTGAAGCGAACGTCGATTTTGAAAATGCTCCTATTAAAGAATCAGCTATTACTCCTGAAACATTAGCTAATCGCGTGGCGACCGAGTCTCGTCGTGGTATTGCACGTATTGCTACAACGGCACAAGTTAACCAAGATACTACATTTGCTTTCCAGGACGATTTAATTATCTCTCCTAAGAAATTAAATGAACGTACTGCTACTGAAACTCGTCGTGGTTTAGCTGAAATTGCAACTCAAACTGAAACCAACCAAGGAACAGATGATAGTACCATTATAACGCCGCTGAAGTTGACAGCACGCAAGGCATCTGAAACTTTAACAGGTATCGCTAAGCTGGTATCGACTGTAGGCACTGCACCAGGTGTAGATCGTCCAACTCTTGGTACTAATGTGTATAACAGTGCTAATAATATTGATATCGTGACTCCTATGTCATTGTCTCAATTAAAAGGTACTTATACCGAACAGGGTCTTTGGATTGGTGCAATTGAATCTGAAGTCATCGCTGGTGTAATGAACAACGGTTTCCCGAACGGTGTTGTTACTCCTGAAATGCTTCATAAGAAAACCTCTACTGATTCTCGTATTGGTCTGATTCAAATTGCTAAACAGGCTGAAGTAGATGCTGGTACTGATTACACTAAAGCTGTTACTCCTAAAACTCTGAATGACCGTAAGGCTTCTGAGACTTTAACGGGTATTGCCGAAATTGCAACCCAGGCGGAGCTAGATGGCGGCACAGATGATGTACGTATTTCTACTCCTTTGAAAATTAAAACCCACTTCGCTGATACTACGCGTCGTGAAGTAACTGCTGCATCAGGTCTTGAAGTTACCGGTACGGTATGGGACAAAATCAGTTTCAACATCAAACCTTCTGCTGAAGCACAACGCGGTACTGCGCGTCTTGCAACACAAGGCGAAGTTGATACTGGCACAGATGATGCGACAATTGTTACCCCACTTAAGTTACAGCGTAAAAAAGCCACTGAAGGTACCGAAGGTATTATTCAGGTTGCTACTCAGGCAGAAGTTATTGCCGGGACTAATGGCTTAAAAGCTGTTCCACCTGTTCATTTGAAATATATTGCACAGACGGAAAAAACTTGGGAAGCTACTGCAGCTCGTCGTGGTTTCGTTAAATTAACTGAAAATACCTTGACGTTTAAAGGTGACGCGGTTAATGGTTCTGGTCGTTTATTGCCAGATGGAAGTGCAAACCTCCCGGCTCTTGATGGTTTAATGAAAGATGGATTTGCCGTATCTCCATATGAGATGAACCGTGCACTTCAGTATTTCTTACCAGCAAATGCCAAAGCTGTTGACACCGATAAATTGGATGGCCTGGATTCACTTCAGTTCATTCGTCGTGACGTCGACCAATCGGTTGAAGGTAAACTCACTTTAACTAAAGAAACGATCCTGACGGCGCCCCTGACGTCCAGCACTTATGCTTCATTCGCTGGTACCCTGAGTGCTAAAGACATTGCAACTGAAGGACCTATTATTATTCTTAATGGGACTAACCGTTGGAATATAAGAGCTCTCAATAATGGGACTACTTTAACCTTCGGTAATACCGCTAACGTACTGACCATTAATAGTGCGACTGGTAACGTTGCTGCTCAGAATAACCTTTCTGCTGGTGCTGAAGTTAGCGCTACCACTAAGTATAATCTGAATAGCCGAACTGTTATTGAGACCACAGCAGGAACTCCTAATGCAACATTGGCAGTTGGTGATAATGCTCAGAACCTGGTTCTGAAAACTTTAGATGCCGGTAATATCGTTGCAAATGGCGGTGGTGCATATAAAGTATTGACCGAGAAGAATGCTAAAGAAATCGTTGACCGTGACTTCGTCAAGAAAGAAGGTGATACGATGGGTGGCAAACTGAACATCAATGCTCCTGTTCTGCCTAAAATCACTGAAGCGCAAGCATTGGCTCCTTTGAATACGAATAACTTCGGTTTCTGGACTGCGGATATAACAACTCCGACCGAATATCAGAAGCTTCCAGGTTATGCTGTTCCTGTGATGGAAATAATCGATGGTTCTTCAACAGGCCATGTCGATCATTATGATTACGTTAAGGCTCCAGGTGTAATGACTGGTACTGGTACTTCATTGACCAGTATGACTCGTACTTGGACTCCACGTCCTCAGTCTGTTCAAGATAACCATAATGCTAACACCATTTGGATTTCTGTTTGGGACTTGGCTCGTAATAAATGGGGTGAATGGGGACGTGTGTATACGAATCAGGCTCCACCAACTGCTGCTGAAATCGGTGCTGTGTCTTCTTCAGGTTCTGCATTTAACAACCTGACTATTCGTGATTGGTTGCAAGTTGGCCAAGTGCGTATCGAGCCGGACCCAGACACTCGTTCAGTTAAATTCACTTGGGTTGACATTCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c174711e707945ac7e7369d9e070b596f0691a7a8096edbaeeea2625a5a612aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5558
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Edwardsiella bacteriophages, PEi20 and PEi26 Yasuike,M., Nishiki,I., Iwasaki,Y., Nakamura,Y., Fujiwara,A., Hassan,E.S., Mahmoud,M.M., Kawato,Y., Nagai,S., Kobayashi,T., Ototake,M. and Nakai,T. 2013-02-28 — GenBank