Protein

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Genbank accession
QQG32194.1 [GenBank]
Protein name
short tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MISNTLKHISDESKYVVFNPENSSFDSNIIDVQHALESISLDGVNGVPLASVSAPGKIQIATQQEVDEGIIGDKAVTPATLASRMAHPEATTTVLGLTQYATNTEAIAGVATNRSIVASALKLLLTILLLSERQKKRKMVF
Physico‐chemical
properties
protein length:141 AA
molecular weight: 15047,04220 Da
isoelectric point:5,87234
aromaticity:0,03546
hydropathy:0,08794

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CkP1
[NCBI] 		2799684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter koseri
[NCBI] 		545 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG32194.1 [NCBI]
Genbank nucleotide accession
MW239124.1 [NCBI]
CDS location
range 91495 -> 91920
strand +
CDS
ATGATTTCAAATACTCTAAAGCATATATCAGATGAATCAAAATACGTTGTTTTCAACCCGGAAAATAGCTCATTTGATTCAAACATCATCGATGTACAACACGCATTAGAATCTATTAGTTTAGATGGTGTAAATGGAGTTCCATTAGCTTCCGTCTCTGCCCCCGGTAAAATACAAATTGCTACGCAACAGGAAGTTGATGAAGGTATTATTGGAGATAAAGCCGTAACTCCGGCAACATTAGCATCTCGTATGGCTCATCCGGAAGCAACTACTACAGTTCTTGGATTAACCCAATACGCTACTAATACTGAAGCAATTGCTGGTGTAGCTACAAATAGATCAATTGTTGCTTCAGCATTAAAGCTGTTATTGACAATACTTTTACTGTCAGAACGGCAAAAGAAACGGAAAATGGTGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
683a90fe922aae46d4d81b4e5ab7761cde34bb19de523db769ea98d3892eff6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
CkP1, a S16-like broad-host-range myovirus, recognizes Citrobacter koseri lipopolysaccharide through its long tail fibres Oliveira,H., Santos,S., Pires,D., Pinto,G., Carrera,J., Briers,Y., Schmelcher,M., Dotsch,A. and Azeredo,J. 2022 — GenBank