Protein

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Genbank accession
YP_009831702.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATGVDPELQAQLDKLTTAVQLIHDFGMSDDPNIPNPEGGVIRTLEGINAAINEAIPNFENANEAAIQARAARDAAIAAKEAAETAAEQATVSSTSAIYEYGNVASAATVTIPAASKTIVSLTLNQPNTVINIGGVSDPSTVARQITIAIKQGTGSNKVTSWDPRIKWANNRKPVLSFLVGYTDVVTLLTFDSGATWIGFFNGGWIK
Physico‐chemical
properties
protein length:207 AA
molecular weight: 21742,14010 Da
isoelectric point:4,75000
aromaticity:0,06280
hydropathy:0,00435

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage UPF_BP2
[NCBI] 		1913047 Uroviricota > Caudoviricetes > Rosemountvirus >
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009831702.1 [NCBI]
Genbank nucleotide accession
NC_048649.1 [NCBI]
CDS location
range 40442 -> 41065
strand -
CDS
ATGGCAACTGGAGTAGACCCGGAACTGCAAGCGCAGCTGGATAAGCTAACAACTGCTGTCCAGCTCATTCATGACTTCGGTATGTCAGACGACCCAAACATCCCTAACCCGGAAGGCGGTGTCATACGCACACTCGAAGGCATTAACGCTGCAATCAATGAAGCTATACCAAACTTTGAAAATGCTAACGAAGCTGCTATCCAGGCGCGCGCTGCTCGTGATGCAGCTATTGCAGCCAAAGAAGCTGCAGAAACCGCAGCTGAACAGGCTACAGTATCTTCGACGTCAGCAATCTATGAGTACGGCAATGTTGCAAGTGCAGCTACCGTAACTATACCTGCTGCATCTAAAACAATTGTCAGCCTTACTCTTAACCAGCCAAACACCGTAATTAATATCGGTGGTGTGTCGGACCCGTCTACTGTTGCGCGTCAGATTACTATTGCTATTAAGCAAGGTACTGGTTCTAACAAGGTGACTTCTTGGGATCCAAGAATAAAATGGGCCAACAACAGGAAGCCCGTTCTGTCATTCCTTGTGGGTTACACAGATGTTGTTACGTTGCTGACCTTTGACTCAGGCGCAACTTGGATTGGTTTCTTTAACGGTGGATGGATTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f7e8641d5dadae2986dbdbe617dfa41b19505c098bdae7db868d79f2c96933d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9171
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and phenotypic characterization of lytic bacteriophages to Salmonella enterica biocontrol Cibulski,S.P., Siqueira,F.M., Pottker,E.S., Webber,B., Mayer,F.Q. and Rodrigues,L.B. 2020-12-31 — GenBank