Protein

View in Explore
Genbank accession
QFG06489.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,75
Protein sequence
MGLSRLDNFLKSTKGEILYVDPSSLDSTDSIENKGNSLARPFKTIQRALLEAARFSYQAGENNDRFGKTTILLYPGEHVVDNRPGWIPIHDQVANTYRLRSGTTSDDFPPLDVNSNFDLDSPNNALYKLNSIHGGVIIPRGTSLVGLDLRKTKIIPKYVPNPENDQIERSAIFRVTGACYMWQFSIFDGDQTGTVYKDYTNNSFVPNFSHHKLTVFEYADGVNPVSINDDFLVYDDTNTDLDMFYQKVGFAYGKPSGREVSPDYPSDSLDIEPKVDEYRIVGSTGAEVGITSIKAGDGAISSTEITVTLENEVPGLDVNTPIRIEGIADEGYDGQFAVFEVLSTTEIKYQVSVPPTNPLPATTSGATLNISVDTVTSASPYIFNISLRSVYGMCGLHADGSKATGFKSMVLAQYTGIGLQKDDNAFVKYNSSTGLYEGTLAAGNENIHTDSNARFKPEYENHHIKCSNNALLQIVSVFAIGFNNHFLLESGGDASITNSNSNFGAKALVSRGFRPDAFPRDDIGYISHFVTPKEIESVEGGIEFLGIDVGVTTSVGIATTSKLFLYGEDNLDVPPATVIDGYRIGSKKDEALKVLLASGNEIETYHSQVVMPSTEGTANEKISEKIHKVKQSNDINVIVSNTLTLEENHTFLNGETIRIISENGGLPDGITEDKIYYAITTAIAPNPALGANQLKIAATLNDANNDVPITINNTGGILSIVSRVSDKSAGDLGHPVQWDETQQQWYVNVSTGSTDVSIYKQLWMRGVAELGETTPRTFVLRKPTDRNVEGSLYKVRYVLPKDSPTLGRPPVDGFVIQESNNIDGTSNSEVEKYLSFDSQTLSNSTEFRNFKFIADAEWSSVDSKATIRTEIPHNLNAGAQVEITNVYSGFNTTGKDNNGFNGTFIVDSVENRKEFKIGIAVNPGDFTSDTSIRNQNLPKLKKKKNSGTFLVYKSDEIQPYVQNEQDGVYHLTIINSSNTPTVSPFTGVKLLQPLDNLYPEYDRDNPSSDPDPARCFAVPDPIGKVVINDPEKSITKETVISTLENNGVGFAVTDILSEDAIDGYRHTVYTSADHGLNRVIEVEIVDPGTNYGSGIGITENLYNAQLVGFAGSVTGSNATARVQVSSAGTLANVQIIDGGSSYGIGNTMSVVGIATTSGHTTGSVRVTKIYDNVGDSVTIERISDLYHGYNTTYQINSIDVGESNSFDVVSATAVGIGSTISGIGNKNSSLGYAYLNGKAYAISASDYTPATGIATFTTGINAHGLQVNDKIYIGGATGDSVLFNGEYLIERTDSLTSLVVNVGVSTLTTITLGGSPTIFSTTLNSKGGEITVGDESYSSRLSIPYGNLQGTLALAMTKVDSNMNVTDLDDLDLEIGDYILVNDEIMRVKQTVVGNPVKVYRGLLGTQAESHVSGSVFRRINARPIEFRRHSIIRASGHTFEYLGYGPGNYSTAFPDRHDRQLSAAEEVLSQSFTEEGGFVVYTGMNSDGDFYISNKRVITTAGDEEVFSTPRPRFRGESKTIPDTKLGFNVIKASEVNVSEAVRVDGGEDKTTISQFDGPLLVNNKLTVTSNKGLESPSLFLQGDETVSRKYTVGVTQPASSVELVGEGAGNPGDIIFNGNPFKGQNAGWVYTTDNDWYPWGAISNKTDVFEIGGYFIGTFTGDGSGLYDVSDIWAIDATGIHTTRNVGFGSTNSSKADVSMYVQGNAEIRGTMKVFEIIENTTLDNATVLGIGTTVINVDLDTSSIYYYTQDAGANWAVNMRARAGLALTDFLEVSESITVAITTKQGGTPYYNDEVYIDDIRMSPRYYGSLTINTGNANSLDLYTYVLVRKSNTGDPVTDFDVLYSQSQYQ
Physico‐chemical
properties
protein length:1853 AA
molecular weight: 200730,98220 Da
isoelectric point:4,71550
aromaticity:0,08904
hydropathy:-0,28149

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFG06489.1
1 1853
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,8105
Central domain 100 312 214 0,8847
C-terminal 313 1853 1540 0,1150
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-312
C-terminal
313-1853

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM1
[NCBI] 		2588487 Uroviricota > Caudoviricetes > Pantevenvirales > Zhoulongquanvirus > Zhoulongquanvirus esscess
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFG06489.1 [NCBI]
Genbank nucleotide accession
MK867354.2 [NCBI]
CDS location
range 176745 -> 182306
strand +
CDS
ATGGGTCTTAGTCGTCTGGATAATTTTCTAAAGAGCACCAAGGGTGAGATTCTTTATGTAGATCCCTCAAGTCTCGATTCTACGGACAGTATCGAGAATAAAGGTAACTCTTTAGCAAGGCCATTTAAAACAATTCAAAGGGCACTGCTGGAAGCAGCACGTTTCTCCTATCAAGCAGGAGAAAATAATGATAGATTTGGTAAAACAACCATTCTACTCTATCCTGGTGAGCACGTAGTAGATAATAGACCAGGATGGATACCAATTCATGATCAAGTGGCAAACACGTACAGACTTAGATCTGGTACTACTTCTGATGACTTTCCACCACTTGATGTCAATAGCAACTTTGACCTAGACAGTCCTAATAACGCATTATATAAACTTAACAGTATTCATGGTGGTGTTATCATTCCTAGAGGTACATCACTAGTAGGTCTCGACCTTAGAAAAACCAAAATTATTCCTAAGTATGTTCCTAATCCAGAAAACGACCAAATTGAAAGATCTGCTATCTTCCGTGTAACTGGTGCTTGTTACATGTGGCAGTTCTCCATCTTTGATGGTGATCAAACTGGAACTGTATATAAAGACTATACTAATAATTCTTTCGTTCCTAATTTCTCACACCATAAGCTAACAGTATTTGAATATGCTGATGGTGTAAATCCAGTATCTATTAATGACGACTTCCTAGTCTATGATGATACAAATACCGATCTTGATATGTTCTATCAAAAGGTTGGTTTTGCATATGGTAAACCATCTGGAAGAGAAGTTTCTCCTGATTATCCTTCTGATAGCCTAGACATCGAACCAAAGGTTGATGAATATCGTATTGTTGGTTCTACTGGTGCTGAAGTAGGAATTACCAGTATTAAGGCAGGTGATGGAGCAATTTCTTCAACAGAAATTACAGTTACACTAGAGAATGAAGTTCCTGGTCTTGACGTAAATACCCCAATTCGTATTGAAGGTATTGCTGATGAGGGTTATGACGGTCAGTTTGCTGTATTTGAAGTTCTTTCAACTACAGAGATTAAGTATCAAGTTTCTGTTCCACCAACAAATCCACTACCAGCAACAACTTCTGGTGCAACACTGAATATTTCCGTTGATACTGTTACATCTGCATCACCATATATCTTTAACATCTCTCTGAGGTCTGTTTATGGTATGTGTGGACTTCATGCTGATGGATCTAAGGCAACTGGATTCAAGTCCATGGTTCTTGCACAATATACTGGTATTGGACTCCAGAAAGACGATAATGCATTTGTAAAATATAATTCTTCTACTGGATTATATGAAGGAACTCTAGCAGCAGGTAATGAAAATATTCATACCGACTCCAATGCTAGATTCAAACCAGAGTATGAGAACCATCATATTAAGTGCAGCAACAATGCACTTTTACAGATCGTTTCGGTTTTCGCAATTGGTTTCAACAATCACTTCTTGCTAGAGTCTGGTGGTGACGCATCTATCACCAACTCCAACTCTAACTTTGGTGCAAAAGCTCTTGTCTCTAGAGGTTTCAGACCAGATGCATTCCCAAGAGATGATATTGGTTATATCTCACATTTTGTAACACCAAAAGAAATTGAATCTGTTGAAGGTGGTATTGAATTCTTAGGTATTGATGTAGGTGTTACTACTTCTGTTGGTATCGCAACAACTAGCAAACTTTTCCTATATGGAGAGGATAATTTAGACGTTCCACCAGCAACCGTAATTGATGGTTATCGTATTGGTTCTAAGAAAGATGAAGCACTAAAAGTTCTTCTTGCATCAGGTAATGAGATTGAGACATATCATTCTCAAGTTGTAATGCCTAGTACTGAAGGTACTGCAAATGAAAAAATATCTGAAAAAATTCATAAAGTTAAACAATCTAATGATATTAATGTAATTGTATCAAATACACTTACTCTTGAAGAAAATCACACATTCTTGAATGGTGAGACTATTAGGATTATTAGTGAAAATGGTGGTCTTCCTGATGGTATTACTGAGGATAAGATATACTACGCAATTACTACAGCAATTGCTCCCAATCCAGCACTCGGTGCAAATCAATTAAAAATTGCTGCAACTCTAAATGATGCTAACAACGATGTTCCAATTACTATCAATAATACTGGTGGTATCCTCAGTATTGTAAGTAGAGTATCTGATAAATCTGCTGGAGATCTTGGGCACCCAGTTCAGTGGGATGAAACACAGCAACAGTGGTACGTTAATGTTTCTACTGGAAGCACTGATGTAAGTATCTACAAGCAATTGTGGATGAGAGGTGTTGCAGAACTAGGTGAAACGACACCAAGAACATTTGTTCTCAGAAAACCAACTGATAGAAATGTTGAGGGAAGTCTTTATAAAGTTCGTTATGTTCTACCAAAAGATTCTCCAACATTGGGTAGACCTCCAGTTGATGGATTTGTTATTCAAGAGTCCAATAATATAGATGGAACTAGCAATTCTGAGGTTGAAAAGTATTTAAGTTTTGACAGTCAAACTCTCTCAAACTCGACAGAGTTTAGAAACTTTAAATTTATTGCAGATGCCGAGTGGTCATCTGTTGATAGCAAAGCAACGATTAGAACAGAAATACCACACAATTTAAATGCTGGGGCACAGGTAGAAATTACCAATGTGTATAGTGGTTTTAATACTACAGGAAAAGATAATAATGGATTTAATGGGACATTTATTGTTGATAGTGTTGAAAATAGAAAAGAATTTAAGATTGGTATTGCAGTAAATCCTGGTGATTTTACAAGTGATACTTCTATTCGTAATCAAAATTTACCAAAACTTAAGAAAAAGAAGAACAGTGGAACATTCTTAGTATATAAGAGTGATGAGATACAACCATATGTTCAAAATGAACAAGATGGTGTATATCATTTAACTATTATTAACTCATCAAATACTCCCACTGTATCACCATTTACTGGTGTAAAACTATTACAACCTCTGGATAATCTTTATCCTGAGTATGATAGAGATAACCCAAGTTCTGATCCAGATCCCGCAAGGTGTTTTGCTGTTCCCGATCCTATCGGTAAAGTTGTTATTAATGACCCAGAAAAGAGTATTACTAAAGAAACAGTAATTTCTACCTTAGAGAATAATGGGGTTGGATTTGCAGTTACTGATATTTTATCAGAAGATGCTATTGATGGGTATAGACATACTGTTTATACAAGTGCCGATCATGGACTCAATAGAGTTATTGAAGTTGAAATTGTTGATCCAGGAACTAATTATGGTTCAGGAATTGGTATTACAGAAAATCTTTACAATGCACAACTAGTAGGTTTTGCTGGTTCTGTTACTGGATCAAATGCAACAGCAAGAGTCCAAGTATCATCAGCAGGTACACTTGCTAATGTTCAAATTATTGATGGTGGTTCATCTTATGGTATCGGAAACACTATGTCTGTTGTTGGTATTGCAACTACATCTGGACATACAACAGGAAGTGTAAGAGTAACTAAAATTTATGATAACGTTGGAGATTCTGTCACTATTGAAAGAATCAGTGATCTTTATCATGGATACAATACAACTTATCAAATCAATAGTATTGATGTTGGTGAATCTAATAGTTTTGATGTAGTCTCAGCAACTGCTGTTGGAATTGGATCCACTATTTCTGGAATTGGAAATAAAAATTCCTCTCTTGGATATGCTTATCTAAATGGAAAAGCATATGCCATCTCAGCATCAGACTATACTCCAGCAACTGGCATTGCTACATTTACAACTGGCATTAATGCTCATGGATTGCAGGTAAATGATAAGATTTATATTGGTGGAGCCACAGGTGATAGTGTTTTATTTAATGGTGAATATTTAATTGAAAGAACAGATTCTTTAACATCACTGGTTGTAAACGTAGGTGTTTCTACTTTAACAACGATAACACTTGGTGGATCACCAACTATTTTCTCAACTACATTAAATTCAAAAGGTGGTGAGATTACTGTTGGTGATGAAAGTTATAGCAGTAGACTTTCTATTCCTTATGGCAATCTTCAGGGAACACTCGCACTTGCGATGACAAAAGTTGATAGTAATATGAATGTAACTGATCTTGATGACTTAGATTTGGAAATCGGTGATTATATTCTTGTCAATGATGAGATTATGAGAGTTAAGCAGACAGTAGTTGGAAATCCAGTTAAGGTTTACAGAGGTCTTTTAGGAACGCAAGCAGAATCACACGTATCTGGATCTGTATTCAGAAGAATTAATGCAAGACCAATTGAATTTAGAAGGCACTCTATTATTCGTGCTTCTGGTCATACGTTTGAATATCTTGGTTATGGTCCTGGTAACTACTCTACTGCATTCCCTGATCGTCATGATCGTCAACTAAGTGCAGCAGAAGAAGTTCTTTCACAATCATTTACTGAAGAAGGTGGATTTGTAGTTTACACTGGCATGAATAGTGATGGTGACTTCTACATCTCTAACAAGAGAGTTATCACTACTGCTGGTGATGAAGAAGTGTTCTCCACTCCACGTCCAAGATTTAGAGGTGAGTCTAAGACAATTCCAGATACTAAACTCGGATTTAATGTTATTAAAGCATCTGAAGTTAATGTTTCTGAGGCAGTAAGAGTTGATGGTGGTGAAGACAAGACAACTATTTCACAGTTTGATGGTCCACTTCTAGTCAATAATAAACTCACTGTTACTTCAAACAAAGGACTAGAATCACCAAGTCTATTCTTACAGGGTGATGAAACAGTTTCTAGAAAATATACTGTAGGTGTTACTCAACCAGCATCTTCTGTTGAACTTGTTGGTGAAGGTGCAGGAAACCCAGGTGATATTATCTTTAACGGAAACCCATTCAAAGGTCAAAATGCTGGTTGGGTGTACACCACTGATAATGATTGGTATCCTTGGGGTGCTATCTCTAATAAGACAGATGTCTTTGAGATTGGCGGATACTTCATCGGTACATTCACAGGTGATGGATCTGGTCTCTATGACGTGTCTGATATCTGGGCAATTGACGCAACAGGTATTCACACCACTCGTAATGTAGGTTTTGGTTCTACAAATAGTTCCAAAGCAGACGTTTCCATGTATGTTCAAGGAAACGCAGAGATTAGAGGCACCATGAAGGTGTTTGAAATTATTGAAAACACCACTTTAGATAATGCTACTGTTCTTGGTATTGGTACTACAGTCATTAATGTGGACTTAGATACCTCATCTATCTACTACTATACACAGGATGCTGGTGCTAACTGGGCAGTGAACATGAGAGCACGTGCAGGACTTGCACTTACCGATTTCCTAGAAGTTAGTGAGTCTATCACAGTTGCTATAACCACAAAACAAGGTGGAACACCATATTATAATGATGAAGTCTATATTGATGATATTAGGATGTCTCCAAGATACTATGGTTCATTGACTATAAATACTGGAAACGCAAATAGTTTAGATCTTTACACGTATGTGTTAGTCAGAAAATCAAATACTGGAGATCCAGTAACTGACTTTGATGTTCTATACTCTCAATCACAATATCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a747756b9dda050d4f2362c50465a82685e0e93a8e41432b93bbfd8c0c644d4f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8729
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank