Protein

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Genbank accession
QNR53618.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAGILIDYNDGRTVMEITAGLRAPSYCTTFDQRCQSDKTLTINTPLTPGSDLVVALTRPVEVIEVFDQTLVLPDPFYVTSVQRNGDSGIILRGADAYNAYSGLPQWAGIIMEVLPVGSRNAGLLVANSTDFTAISNVSRLMTCRYAQRVHVNGSMPLPVGGIPFARWDNGNVSVGFDGSNIIVRNSSYGGIDDVGAEVDLDLVIFNNTPPSPGTGITMTNNQGQVTFSTVNKPFVLNSVINIGTGGQNIGNSLVQLSYTGALIENNSGYNHVRMNGIRMAGNVVSSARNRVIGNYSRQQFQMPNRNITVPTPLLVIPNMY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34481,66040 Da
isoelectric point:5,67704
aromaticity:0,07165
hydropathy:-0,00872

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
QNR53618.1
1 321
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNR53618.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 85 85 0,1366
Central domain 86 284 200 0,0240
C-terminal 285 321 36 0,9947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-85
Central
86-284
C-terminal
285-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vb_EcoS_bov16_1
[NCBI] 		2763526 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNR53618.1 [NCBI]
Genbank nucleotide accession
MT884013 [NCBI]
CDS location
range 21146 -> 22111
strand -
CDS
ATGGGCGCTGGAATACTTATAGACTACAACGACGGAAGGACGGTGATGGAGATAACTGCCGGTCTACGCGCTCCGTCATACTGCACTACGTTTGATCAACGCTGCCAGTCAGACAAGACGCTGACCATTAACACCCCGCTAACACCTGGGTCGGATCTTGTCGTTGCGCTCACGCGCCCTGTCGAAGTGATTGAGGTATTCGACCAAACGCTGGTTCTTCCAGATCCGTTCTACGTGACGTCGGTACAACGCAACGGGGATAGCGGAATTATTCTACGAGGCGCGGACGCGTATAACGCCTACAGCGGCCTCCCTCAATGGGCGGGGATAATTATGGAAGTGCTGCCGGTGGGGTCACGCAATGCGGGCTTGCTGGTGGCGAACTCGACAGACTTCACCGCGATTTCCAACGTGTCCCGGCTAATGACCTGCCGCTACGCGCAGCGCGTGCACGTGAACGGTAGTATGCCTTTGCCTGTGGGCGGTATCCCGTTCGCGCGCTGGGATAATGGCAACGTGTCGGTAGGATTTGATGGCAGTAATATCATCGTCCGCAATTCGTCTTATGGCGGGATCGACGACGTAGGGGCCGAAGTGGACCTGGATTTGGTTATCTTCAATAACACGCCGCCATCACCGGGGACCGGTATAACCATGACGAACAACCAGGGGCAGGTCACGTTCTCTACCGTGAATAAGCCGTTTGTTCTCAATTCCGTTATTAATATCGGCACTGGTGGTCAGAATATCGGTAACAGCCTCGTACAGCTTTCATATACCGGCGCGCTTATTGAGAACAACAGCGGATACAACCACGTGAGAATGAACGGGATACGCATGGCAGGCAACGTGGTTAGCTCGGCTCGAAATCGCGTGATTGGTAACTACTCACGGCAGCAATTCCAGATGCCTAACCGCAACATAACCGTACCCACCCCGTTACTCGTCATCCCTAACATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4d96d2fb18fd0cf3ad26bb8d1b2b2726bd0d8a4f407050f52dea2b819a881bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomes of novel bovine T4, rv5-like and Dillon viruses effective against Escherichia coli O157 Svab,D., Falgenhauer,L., Chakraborty,T. and Toth,I. 1975-07-29 — GenBank