Protein

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Genbank accession
YP_009834236.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSTLRVDTITDEAGTGPVEFTNGINVSGGTVTGIQPSGSQTFTASGSITAGDVVGLNTSGDVSSTAAGLIAESAFFVDTSPVTSCYDEGTNKHVVLYRDWTDSGKYKTVVATVSGSTVSLGTPSNMDFFDVYLDTDQNLVAGPSGKVVLFGRYNSTYGAGAYTVGTISGTSLSWGSRVNFSSAGSIDQVNGVKATYDKSQDRFLIFYMHNDASENYATVVQAASLSGTSLSFGARVQVYNNFGYYLQMVHCSNLNKTACFFTNPSDGKTYGFLASISGTTVSVTTPTAMDMFSAGSGLDFYMTSIAYNPLTSRVALVGYDGGGYTQNAGILYSIAATSTTLTSVGQVVLPDPISGSSMAFNEDTGYILLTVSSGLGVNMGVHTYSVYVQEDSVSYTESCFGSTTGYYLSAPRALSYDPDAGGFFMWGISSYERGTTERIKVLDFEGPHANPIGIAEETRTNGQAVSVSVAGSIVTGLSGLSAGSPYGVNPYNGNLTINGSSTLGYALSSTSLYIK
Physico‐chemical
properties
protein length:515 AA
molecular weight: 53719,63350 Da
isoelectric point:4,49354
aromaticity:0,10874
hydropathy:0,02330

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009834236.1
1 515
Domain Start End Length (AA) Confidence
N-terminal 1 85 85 0,3202
Central domain 86 298 214 0,6813
C-terminal 299 515 216 0,5267
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-85
Central
86-298
C-terminal
299-515

Taxonomy

  Name Taxonomy ID Lineage
Phage Lentibacter phage vB_LenP_ICBM2
[NCBI] 		2847823 Uroviricota > Caudoviricetes > Zobellviridae > Veravirus > Veravirus septentrionalis
Host Lentibacter sp.
[NCBI] 		2024994 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009834236.1 [NCBI]
Genbank nucleotide accession
NC_048671 [NCBI]
CDS location
range 34452 -> 35999
strand -
CDS
ATGAGTACACTTCGAGTAGATACAATCACAGATGAAGCTGGCACTGGCCCTGTTGAGTTTACCAATGGTATTAACGTCAGTGGCGGCACAGTTACAGGTATTCAGCCAAGTGGCTCTCAGACCTTCACAGCTTCGGGTAGCATTACCGCAGGAGATGTCGTTGGTCTTAATACCTCTGGAGACGTCAGTTCTACAGCAGCAGGGCTTATAGCTGAGAGTGCTTTTTTTGTTGATACCAGTCCTGTAACATCTTGCTACGACGAAGGTACAAATAAACATGTTGTCTTGTACCGAGACTGGACCGACTCAGGTAAGTATAAGACAGTTGTAGCCACTGTCAGCGGCTCAACGGTTAGCCTTGGCACTCCATCTAATATGGATTTTTTCGATGTATATTTAGATACAGACCAAAACCTCGTAGCTGGGCCTAGTGGAAAAGTTGTTTTGTTTGGAAGGTATAACTCCACATACGGAGCAGGGGCCTATACCGTTGGTACGATCTCTGGCACTTCTCTGTCTTGGGGTTCCCGTGTTAATTTTTCAAGTGCAGGGTCAATCGACCAAGTTAATGGAGTGAAGGCCACTTACGATAAATCTCAGGACAGGTTCCTTATTTTCTACATGCACAATGACGCATCAGAGAACTACGCTACAGTAGTGCAAGCAGCTTCGTTAAGTGGGACAAGTCTTTCTTTTGGGGCAAGGGTCCAAGTTTATAACAACTTTGGATATTACTTACAGATGGTGCACTGCTCCAATCTGAATAAGACTGCATGCTTCTTTACCAATCCTAGTGACGGTAAGACATATGGTTTTCTCGCTTCTATTTCAGGCACAACGGTGTCAGTCACAACACCTACCGCTATGGATATGTTTTCGGCTGGCAGCGGGCTTGATTTCTACATGACGAGCATTGCCTATAACCCACTGACAAGCAGGGTTGCTCTTGTTGGTTATGATGGAGGCGGTTACACCCAAAATGCTGGTATCCTTTATAGTATCGCAGCAACCAGCACGACCCTTACATCAGTTGGTCAAGTAGTCCTACCCGACCCTATTAGTGGTTCCTCAATGGCCTTTAATGAGGATACGGGGTATATACTATTAACTGTAAGTAGTGGTTTGGGAGTGAACATGGGTGTCCATACCTACTCCGTTTACGTGCAGGAAGATTCTGTAAGCTATACCGAAAGCTGCTTTGGCAGTACAACTGGTTACTACCTGAGTGCACCAAGGGCTTTGAGTTACGATCCTGATGCAGGTGGCTTCTTTATGTGGGGTATTTCTTCCTACGAGCGTGGCACAACAGAGAGAATTAAAGTACTTGACTTCGAAGGCCCTCATGCAAACCCGATTGGCATAGCGGAAGAGACAAGAACAAACGGACAGGCAGTATCTGTATCTGTTGCGGGTTCCATTGTCACAGGTTTGTCTGGCCTTTCAGCGGGCAGTCCTTATGGAGTTAATCCTTATAATGGCAACCTGACTATAAACGGTTCTTCTACTCTTGGTTACGCTTTGAGTTCAACTTCACTCTACATCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18d0c97290d05536ac43a377708a96d9221712fd9683b2f63cc63d912947ae18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7696
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50