Protein

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Genbank accession
XXJ62825.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MSGTNIFTHISDEAQYVYLQPFVSPGAAFESGGDVQSIIAQINESALQPIPALPYATTSEEGAVEYSTQAEANGLSSLLTVLTPETLDGVDQFVSPATDTQLGNLQELSSGDLTRSYATSNASKLLSYRRLDEMMTVRAALTDDGTDQSRGFLEFANLSESLAYASDKFISPLRTWNLIKQEIPNPWSQATESAVGILRTVAARDGKRSDPSIAITVGGLNHVDASTSKRGAFKLTSNNYNRNASDANEYVVTPGTISNLIATAGQVGFMQLPASYVNDPLLATNAALGVDLATKLGPDGGTITGTLQCDNIQSRLTYRQKQTSYSGTYYTTVVEDREMFPSNQLDSKIGLAGRPVGSIFHCTANVDPNTLFGGVWYRVRAGQTMMGQGTGDDGSRRRYFAAGAQRNDDTITLTQRNLPTHKHAGFGEAYKSVNGDCIRYTILRNPYGVSLYCTEYSRAEYWEFGSTGERNHRGMRKTDSDNYLYYNEPVGGGQAHENMMPYQAVYIWRRVK
Physico‐chemical
properties
protein length:512 AA
molecular weight: 55893,31890 Da
isoelectric point:5,32601
aromaticity:0,09180
hydropathy:-0,42734

Domains

Domains [InterPro]
DC_0176
STR
1–462
DC_0176
IPR053827
ATT
355–511
IPR053827
IPR044916
STR
378–498
IPR044916
XXJ62825.1
1 512
Architecture
STR
ATT
STR 1-354 | ATT 355-511 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CZ01
[NCBI] 		3435809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ62825.1 [NCBI]
Genbank nucleotide accession
PV740454.1 [NCBI]
CDS location
range 127269 -> 128807
strand +
CDS
ATGTCAGGAACAAACATATTCACGCACATTAGTGACGAGGCTCAATATGTTTACCTGCAACCGTTTGTATCGCCTGGCGCAGCTTTTGAGTCAGGCGGTGACGTACAAAGTATCATAGCTCAAATTAACGAAAGCGCACTACAACCAATTCCTGCATTACCTTACGCGACGACTAGCGAAGAAGGCGCAGTTGAATATTCAACCCAAGCTGAAGCTAATGGTCTGAGCAGTCTTTTGACAGTGCTAACACCTGAAACTCTAGATGGGGTTGATCAGTTCGTATCGCCGGCTACTGATACTCAGTTGGGTAACTTACAAGAGCTGAGTTCTGGTGATTTGACTCGCTCGTATGCAACGTCAAACGCAAGCAAATTGCTTTCATATCGCCGTCTAGATGAAATGATGACTGTCCGTGCGGCACTAACAGATGATGGTACAGATCAATCTCGTGGTTTTCTGGAATTTGCAAATTTGTCAGAATCGTTAGCGTATGCATCTGACAAGTTCATTTCACCACTAAGAACTTGGAACTTAATCAAACAAGAAATTCCGAACCCATGGTCTCAGGCAACTGAATCAGCCGTCGGTATTCTTAGAACAGTAGCGGCTCGTGATGGGAAGCGTTCTGATCCATCAATTGCAATTACAGTAGGTGGGTTAAATCATGTTGACGCAAGCACTTCAAAACGCGGTGCATTTAAATTAACATCAAACAACTACAATCGAAACGCAAGTGATGCTAACGAGTATGTAGTAACACCTGGCACTATTTCAAATCTAATTGCGACAGCAGGTCAAGTTGGGTTTATGCAATTGCCTGCATCATACGTCAATGATCCGCTTTTGGCAACAAACGCTGCTCTAGGTGTTGATTTAGCAACAAAGCTAGGCCCTGACGGTGGTACTATCACTGGTACATTACAGTGTGATAATATCCAAAGTCGCTTGACATATAGACAAAAACAAACAAGCTATAGTGGCACATATTACACAACGGTCGTTGAAGATCGCGAAATGTTCCCAAGTAATCAGTTAGATTCTAAAATAGGTCTTGCTGGTAGACCAGTAGGCAGTATTTTCCATTGTACTGCAAACGTAGACCCAAACACTTTATTTGGTGGCGTGTGGTATAGAGTACGCGCAGGTCAAACAATGATGGGACAAGGTACTGGTGACGACGGGAGTAGACGACGTTACTTTGCAGCCGGTGCTCAGCGAAATGACGATACTATTACACTGACACAACGCAATCTACCGACACACAAACACGCTGGGTTCGGAGAAGCGTATAAATCAGTGAATGGTGACTGTATTCGTTACACGATTTTAAGAAACCCGTATGGTGTGTCTTTGTACTGTACTGAATATTCACGCGCAGAATACTGGGAATTTGGTTCGACAGGTGAGCGAAATCATAGAGGTATGCGTAAAACAGATAGTGACAACTACCTATACTACAACGAGCCAGTTGGTGGTGGTCAAGCACATGAAAACATGATGCCATATCAAGCTGTTTACATTTGGAGACGAGTTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cf11bfa5feba3e9b5a0f9d44248185004f83b4a8f56aeed4536458cbd06610a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5860
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Bacteriophage CZ01 Zhu,L. and Zhu,D. 2015-12 — GenBank