Protein

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Genbank accession
AGH32160.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNMGTLATTNVSNSADKYVVRQSGIDYVQTRDTLAAAINSSSWTASADYATGVFVRGSDSNLYVSVQTSGISTTSVDPTTDTDWSHWQPLEALFEVSPRNNDWNGYLDPEHQSILPSDPVKGYPTTGGVVYAANEVISFGIRAGSSGQLVKSDPDGWTFTGSIYKLYDYTTEQLDNIDVTKVPIYLKDQDGIEYFVNNSTTGVNVTKVGSQLKVEITYAIFSELGITKLWRFFPTEVVGRVVELSAKESLNLQSAALKSIMKTKDVTGSRAFGVEYPNNLPVSIFVSITTLSASTAAGRTVTRDGVSDTRNSNYVAGQGGVSVSFDFEVPPGGTYEYSASFTKWTETGF
Physico‐chemical
properties
protein length:350 AA
molecular weight: 37900,40590 Da
isoelectric point:4,66201
aromaticity:0,10857
hydropathy:-0,22743

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 11895-B1
[NCBI] 		754075 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH32160.1 [NCBI]
Genbank nucleotide accession
HQ634157.1 [NCBI]
CDS location
range 57245 -> 58297
strand -
CDS
ATGAGTAATATGGGTACATTGGCAACTACCAATGTTAGTAACTCCGCAGATAAGTACGTAGTTAGACAAAGCGGAATAGATTATGTGCAAACAAGAGATACATTAGCTGCTGCGATAAACAGTTCATCTTGGACAGCCTCCGCAGACTATGCAACCGGAGTTTTTGTCCGAGGAAGTGATAGTAATCTTTATGTATCAGTACAGACTTCAGGAATATCAACTACATCAGTTGACCCGACAACAGATACGGATTGGTCACATTGGCAACCTTTAGAAGCTTTATTTGAAGTATCACCACGTAATAACGATTGGAACGGATACCTAGATCCAGAACATCAGTCTATCTTACCTAGTGACCCAGTAAAGGGATATCCAACCACCGGAGGGGTTGTTTATGCTGCCAATGAAGTAATAAGCTTTGGTATTAGGGCTGGATCATCTGGACAACTAGTAAAGAGCGACCCAGATGGCTGGACTTTCACTGGATCGATTTATAAGTTGTACGACTACACCACTGAGCAATTAGATAATATTGACGTTACGAAAGTTCCCATTTATCTAAAAGACCAAGACGGGATTGAGTATTTCGTTAATAATTCCACAACTGGGGTTAATGTCACGAAAGTTGGTAGTCAGCTAAAAGTTGAAATTACTTACGCGATTTTTTCCGAGCTAGGTATTACTAAGCTGTGGCGATTCTTTCCTACAGAAGTAGTTGGTCGAGTTGTTGAGTTGAGCGCAAAAGAGTCTCTCAATTTACAATCAGCCGCATTAAAATCAATAATGAAAACCAAGGATGTTACAGGCTCTAGAGCTTTCGGGGTTGAATATCCTAACAATTTACCGGTTTCAATATTTGTAAGCATAACAACTCTCTCAGCATCGACTGCTGCCGGAAGAACAGTAACAAGAGACGGTGTTTCCGACACAAGAAATTCAAATTATGTGGCGGGGCAGGGTGGTGTGAGTGTTAGTTTCGATTTCGAGGTGCCACCCGGAGGTACGTATGAATACAGCGCATCTTTCACAAAATGGACTGAGACAGGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
12e5662a57f280db1b63e45c81394ca8c62ee4f03e511b55d0f86b907bff95b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage 11895-B1 Henn,M.R., Wharam,S., Gilg,I., Martinez Martinez,J., Wilson,W., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank