Protein

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Genbank accession
QDP43490.1 [GenBank]
Protein name
DUF2479 domain-containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MRNEEIIIDLADPVFTKTIRSRQNDKNGLRLTVYVREKGQNVDLTGYAVKYEATNHTGVFIRDDAQIVDSKNGVFSYTFTSQAVSTSDDWTAYFVMEKSTERMSTPDIRITLRRDVKEGNIKIENYISDFDNLKKQIDALQQAVDKMDVVKRSGGMMTGYLTMRPTIGSNIGVGFNSEDKVLDIGLVGVSDGQLYLKDWKNNKVLFEKSPTGIFNVFADNLLKKAGDIINGLLEFKSDNAIVLGSRSYKTVIHKGAQGELIFAPSTKEQGDSWDWSKRVEFRTDGTIRQATDTGWINLPTTGVENVPDRILKYKRSGEHVNVIGSIRNAQNATVFATLPVGCRPVQDIAVPAIMITGGVNTNFCEVTVKKEGGIFVNGVQSGSTFHIAMSFLI
Physico‐chemical
properties
protein length:393 AA
molecular weight: 43622,02260 Da
isoelectric point:7,67590
aromaticity:0,08397
hydropathy:-0,28168

Domains

Domains [InterPro]
DC_1249
STR
1–373
DC_1249
G3DSA:2.60.40.3350
ATT
3–118
G3DSA:2.60.40.3350 Coil
IPR018913
ATT
13–137
IPR018913
QDP43490.1
1 393
Architecture
ATT
STR
ATT 1-137 | STR 138-373 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDP43490.1
1 393
Domain Start End Length (AA) Confidence
N-terminal 1 165 165 0,9895
Central domain 166 364 200 0,3548
C-terminal 365 393 28 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-165
Central
166-364
C-terminal
365-393

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BthS-HD29phi
[NCBI] 		2593661 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus thuringiensis
[NCBI] 		1428 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDP43490.1 [NCBI]
Genbank nucleotide accession
MN065183 [NCBI]
CDS location
range 28370 -> 29551
strand +
CDS
ATGCGAAACGAGGAAATTATTATAGACTTAGCAGATCCTGTGTTCACAAAAACAATTCGTTCTCGGCAGAATGACAAGAATGGATTGAGGCTCACTGTGTACGTAAGAGAAAAAGGGCAGAATGTGGATTTAACAGGATATGCGGTTAAATATGAAGCGACAAATCATACAGGAGTATTCATTCGAGATGATGCTCAAATAGTTGATTCAAAAAATGGTGTGTTTTCCTATACGTTTACATCTCAAGCTGTTTCCACATCGGATGATTGGACAGCTTATTTTGTGATGGAAAAAAGTACAGAACGAATGAGTACACCAGATATTCGTATTACATTAAGACGTGATGTGAAAGAAGGAAATATTAAAATTGAAAATTATATTTCTGATTTTGATAATCTCAAGAAACAGATAGATGCTTTGCAGCAAGCGGTTGATAAAATGGACGTCGTAAAGCGTTCAGGCGGGATGATGACAGGTTATCTAACGATGAGACCGACAATCGGTTCCAATATCGGAGTTGGATTCAATAGTGAGGATAAGGTATTAGATATCGGTCTTGTAGGAGTCTCGGATGGTCAATTATATTTAAAAGACTGGAAAAATAATAAAGTATTGTTTGAAAAATCGCCTACTGGGATATTCAATGTTTTTGCTGATAATCTTCTAAAAAAAGCTGGCGACATTATAAATGGATTACTTGAATTTAAGAGTGATAATGCAATTGTATTAGGAAGTCGTTCTTATAAGACAGTTATTCATAAAGGGGCGCAAGGAGAGCTGATTTTTGCACCTTCCACCAAAGAACAAGGTGATTCTTGGGATTGGTCCAAAAGAGTAGAATTTCGAACAGATGGCACTATTAGGCAAGCAACAGATACAGGGTGGATTAACCTTCCTACAACTGGGGTAGAGAATGTTCCTGATAGAATTTTGAAGTATAAAAGAAGTGGAGAACACGTTAATGTAATTGGTTCTATTCGAAATGCGCAAAACGCAACAGTATTTGCTACACTTCCAGTTGGATGTAGACCCGTTCAAGACATTGCGGTTCCAGCTATTATGATAACTGGAGGAGTGAATACAAACTTTTGTGAAGTTACAGTAAAAAAAGAGGGTGGGATTTTCGTGAATGGTGTCCAAAGTGGAAGTACTTTTCATATTGCAATGAGCTTTTTAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d92e3ce0b01398a5b58d81383c9700a1f57adecb61d8ae88a5fa8dbd5a173f81
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50