Protein

View in Explore
Genbank accession
QHR69776.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAANTPEQHVQAVYKAEQEINSTKNTNNSASTVKGENGFCILASVYNSASDQYIQNYQAIVFDAVPNIGVKRQADVTSYPVENGANVSDHVQVKNNTFSLSGMITETPVRLMRDMLYSAGVNGTRISQAITYLDKIFDQRQPIILITEHKVYENVILKGISYEYQTEYAMQFDLEFEQVRLVSYGETNAIALKTQPNKNTGVKNKTNATGSKPDADLNKRAGQATGTEHLSNDSPDGK
Physico‐chemical
properties
protein length:238 AA
molecular weight: 26268,90040 Da
isoelectric point:5,60986
aromaticity:0,07563
hydropathy:-0,54622

Domains

Domains [InterPro]
DC_0628
STR
42–238
DC_0628
IPR048494
ATT
62–187
IPR048494
QHR69776.1
1 238
Architecture
STR
ATT
STR
STR 42-61 | ATT 62-187 | STR 188-238
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage inny
[NCBI] 		2696407 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR69776.1 [NCBI]
Genbank nucleotide accession
MN850601.1 [NCBI]
CDS location
range 62353 -> 63069
strand +
CDS
ATGGCAGCAAACACTCCAGAACAACACGTTCAAGCGGTTTATAAAGCGGAACAAGAAATAAATTCTACAAAAAACACAAATAACTCTGCCTCTACTGTGAAAGGGGAGAATGGTTTTTGTATTTTAGCAAGTGTTTACAATAGTGCAAGTGATCAATATATTCAAAACTACCAAGCTATAGTTTTTGATGCTGTTCCAAATATCGGTGTAAAACGTCAAGCTGATGTTACGAGCTATCCTGTAGAAAATGGTGCTAATGTATCGGATCACGTTCAAGTTAAAAATAATACTTTCTCTTTATCAGGAATGATTACAGAGACACCTGTAAGATTGATGCGAGATATGCTATATAGTGCTGGTGTTAACGGTACTCGTATCAGTCAAGCAATTACTTACTTAGATAAAATATTTGATCAAAGACAGCCTATCATTTTAATAACAGAACATAAGGTGTATGAGAATGTTATTTTGAAAGGCATATCATATGAATATCAAACAGAGTATGCAATGCAATTTGACTTGGAATTTGAACAAGTAAGATTAGTTTCTTACGGAGAAACCAACGCTATTGCACTTAAGACTCAACCAAATAAAAACACAGGTGTTAAGAACAAAACAAACGCAACAGGTAGCAAACCAGATGCTGATTTGAACAAACGAGCAGGACAAGCAACAGGCACTGAACATTTGAGTAATGACAGTCCAGATGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
55b615bd3978958059e8cac19c4f5f197e103eba4ac655e9e2a775d2d52a9a1e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank