Protein

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Genbank accession
AXH71654.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,73
Protein sequence
MGGVVSQSIPNFLNGISQQTPTQRGINQAEEQVNLQNNIVDGLSKRPAFEYIDTIDATNVYPNTVKFWSIQRDKENQFVVILYNGGVKVYDLDGNEKTVTVASGSSYLTTTNPKADFKLVNIADYTFIANKSKTVLADTTLSTAKIEEFYINVVTSNYGREYAVTVRHPNMSYDVKASLQMPSGSNLNHDAVFRDTAHIADILFRGTSSTHFDSSSDASFKLTREDTGATLSTTQGLGTSSEVTNYFTMSQYPGVIRGISTNGNSNYTVLTADGSGNTGMYSIRDEISDFTKLPYHASTDSIIKVTGDEGDTLSDYYVKFETDGVWKETIGQGVSLGLDNSTMPHALINNNDGTFTFQEIDYDDRNAGDGITNSNPSFVGNKINNLLFYKNRLGILARDNLILSENAGFFNFFSKTVTQVLDTDAIDIAASGSEVNTLFDSVAFNESLLLFSEKAQYKLGSVGETISPTSAVLNEVSAFEFDANVKPVSAGKYAYFAQARNNNTAIREYYADDDTLTNDGLDITVSVQNLIPSNAYQLISNTTEDTLIALASDTADTQLTPYTTGTPITSTNGGTMFIYKYFFDKGEKVQTAWSKWTFTNAKILGGMSFESFVYLLVVEGTDTKLVKIDLRNLRNGTIGFNVYLDLRTSVTGTYDANTNLTTFTSPYGAKTGLIAVDGVNGNNYAVTNTAGATYTLEGNHTNLIIGIPYESKYRMSPQYVRESSGRGLVAITSGRYQIRNISLNYETSGYFQVEVTPNGRDTSYSFMNGYVIGTATSKVGVPAISSGTIKVPVSCRNTDFTLDIKSSSHLPMYIASAEVEGYYHNRSTRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 90765,40250 Da
isoelectric point:4,86112
aromaticity:0,10602
hydropathy:-0,28193

Domains

Domains [InterPro]
IPR058003
TTP
4–830
IPR058003
Coil
Unmapped
26–46
Coil
AXH71654.1
1 830
Architecture
TTP
TTP 4-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71654.1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9808
Central domain 135 355 222 0,5979
C-terminal 356 830 474 0,4279
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-355
C-terminal
356-830

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC031P
[NCBI] 		2283017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71654.1 [NCBI]
Genbank nucleotide accession
MH598800 [NCBI]
CDS location
range 20104 -> 22596
strand +
CDS
ATGGGTGGAGTAGTATCTCAGAGTATTCCTAATTTTCTGAATGGTATCTCACAACAAACACCAACACAGAGAGGTATCAATCAAGCAGAAGAACAGGTAAATTTACAAAACAATATTGTAGATGGTTTATCTAAAAGACCTGCTTTTGAATACATAGACACTATAGATGCTACTAACGTATATCCAAACACAGTAAAATTTTGGTCTATACAAAGAGATAAAGAAAATCAATTTGTTGTAATTCTTTATAATGGTGGTGTAAAAGTTTATGATTTAGATGGTAATGAAAAAACAGTTACAGTTGCAAGTGGGTCTAGTTATCTAACTACAACTAATCCAAAAGCAGATTTTAAATTAGTTAATATTGCTGATTATACTTTTATTGCAAATAAATCTAAAACAGTATTAGCAGATACAACATTAAGTACAGCAAAAATAGAAGAGTTTTATATTAATGTTGTAACATCTAATTATGGTCGAGAGTATGCTGTAACAGTAAGACACCCTAATATGTCTTATGATGTTAAAGCTTCTTTACAAATGCCTTCAGGTTCTAATTTGAACCATGATGCAGTATTTAGAGATACTGCTCACATTGCAGATATTTTATTTAGAGGTACATCTAGTACACATTTTGATAGTTCGTCTGATGCTAGTTTTAAATTAACTAGAGAAGACACAGGAGCAACTTTAAGTACAACTCAAGGATTAGGTACATCTAGTGAAGTAACAAATTATTTTACTATGTCTCAATATCCGGGAGTTATCAGAGGTATTTCAACAAATGGTAATAGTAATTACACCGTGTTAACTGCTGATGGTTCAGGTAATACAGGTATGTATTCTATAAGAGATGAAATATCTGACTTTACAAAATTACCTTATCATGCAAGTACAGACAGTATTATAAAAGTTACAGGTGATGAAGGAGATACTTTATCTGATTATTATGTTAAGTTTGAAACAGATGGTGTTTGGAAAGAAACAATAGGTCAAGGTGTTAGTCTTGGTTTAGATAATTCTACAATGCCACACGCATTGATTAATAATAATGATGGTACATTTACATTTCAAGAAATAGACTATGATGATAGAAATGCAGGTGATGGTATTACAAACTCTAATCCAAGTTTTGTAGGAAACAAAATTAATAATTTATTATTTTATAAAAATAGATTAGGTATACTAGCAAGAGATAATTTAATATTATCTGAAAATGCAGGATTTTTTAATTTCTTTTCTAAAACAGTAACACAAGTATTAGATACTGATGCTATTGATATTGCGGCTTCAGGTTCTGAAGTTAATACATTATTTGATAGTGTTGCATTTAATGAAAGTTTATTATTGTTTTCTGAAAAAGCACAATACAAATTAGGTAGTGTTGGAGAAACTATATCTCCTACAAGCGCAGTACTTAATGAAGTATCAGCATTTGAATTTGATGCTAATGTTAAACCTGTATCAGCAGGTAAGTATGCATACTTTGCACAAGCTAGAAACAACAATACAGCTATTAGAGAGTATTATGCAGATGATGACACATTAACAAATGATGGTTTAGATATAACAGTATCAGTACAAAATTTAATACCAAGTAATGCATATCAATTAATTAGTAATACAACAGAAGATACATTAATTGCTTTAGCTTCTGACACAGCAGACACACAACTTACACCTTACACTACAGGAACACCTATTACATCAACTAATGGTGGTACTATGTTTATCTACAAATACTTTTTTGATAAAGGTGAGAAAGTACAAACAGCATGGTCTAAATGGACTTTTACTAATGCTAAAATATTAGGTGGTATGTCTTTTGAAAGTTTTGTTTATTTATTAGTTGTTGAAGGTACAGATACTAAATTAGTAAAAATTGATTTAAGAAATTTAAGAAACGGTACTATAGGTTTTAATGTATATTTAGATTTAAGAACAAGTGTTACAGGAACATATGATGCTAATACTAATCTAACTACATTTACATCACCGTATGGTGCTAAAACAGGTTTAATTGCAGTAGATGGTGTCAATGGTAATAACTACGCTGTGACAAATACAGCAGGTGCTACATACACATTAGAAGGCAATCATACAAATTTAATTATTGGTATTCCATATGAAAGTAAATATAGAATGTCACCTCAATATGTTAGAGAAAGTTCAGGAAGAGGCTTAGTAGCTATTACTTCAGGACGTTATCAAATTAGAAACATATCACTTAATTATGAAACTTCAGGTTATTTTCAAGTTGAAGTAACACCTAACGGTAGAGATACAAGTTACTCATTTATGAATGGATATGTTATAGGAACAGCTACAAGTAAAGTAGGTGTGCCTGCTATTAGCTCAGGTACTATTAAGGTACCCGTTTCATGTAGAAACACAGATTTTACATTAGATATTAAAAGTTCTTCACATTTGCCAATGTATATTGCTAGTGCAGAAGTGGAAGGATATTATCATAATCGTTCAACAAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
739f491817b55251321378b966c1786491a31244edb99672fda7b5cc60f5dc27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8952
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50