Protein

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Genbank accession
YP_010113188.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MDTGIFIGDKIITTSWDKIWDKPNTLSGYGITDAYTKTDADSRYFRHIGDTHEDGRNTGWIGFGTGTYINAYPDGIAHKIYSYGQVTLFNSSSSRLELYSTHTSSDPNDGNNGIQFRSGWDDDKKSWRMLLDEVNYLYYTDNRYVNKAGDTMTGTLLFNANSGIDLASIPETKSAISFNNAGSNRIGINFTDGDGNLRIARTDINQDWASGDVDILLGSNNYKVWHAGNDGSGSGLDADLLDGKHLHQGQWDSICYIGGDGVLEIGKYIDFHEEQGISSDFSCRIMAQGDYQNTLHLPTSSGILATLEDNVASSTKLQTPRTIFSKPFDGTSNVTGGAKFNGICIETDNNGNDSGRSNEINNYVDSLRLQHASSNNLICCMGGGMVGIGTISPAYTLHVNGVIYAKDGFRETSDIRKKKVLNSHTVSLDDMAYADLFDYTLIDDEKEIVRVGTNAHYWLDKLPQVVTKDNDEYLSLNYGVLGTVCALSVSKYVKQLEDRVTLLENKIASLL
Physico‐chemical
properties
protein length:511 AA
molecular weight: 56221,37740 Da
isoelectric point:4,83628
aromaticity:0,09589
hydropathy:-0,44149

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010113188.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,9200
Central domain 33 231 200 0,1790
C-terminal 232 511 279 0,9206
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-231
C-terminal
232-511

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr125_1
[NCBI] 		2772091 Uroviricota > Caudoviricetes > Crassvirales > Uncouvirinae > Aurodevirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010113188.1 [NCBI]
Genbank nucleotide accession
NC_055900 [NCBI]
CDS location
range 47706 -> 49241
strand -
CDS
ATGGACACCGGCATATTTATAGGGGACAAAATAATTACCACATCGTGGGATAAGATATGGGATAAACCAAATACTCTAAGCGGCTATGGGATTACGGATGCTTATACGAAAACGGATGCGGATAGCAGATATTTCAGACATATCGGAGATACGCATGAAGATGGCAGAAACACAGGATGGATAGGATTTGGTACTGGTACTTATATTAACGCTTATCCTGATGGAATTGCACATAAAATATACTCTTATGGACAAGTAACATAGTTTAATTCAAGTTCTTCAAGGCTTGAATTGTATTCTACTCATACATCATCAGATCCAAACGATGGCAATAATGGCATACAATTTAGATCAGGATGGGATGATGATAAGAAAAGCTGGCGAATGCTTCTTGATGAAGTTAACTATCTTTATTATACAGATAATCGCTACGTCAACAAGGCAGGGGATACGATGACGGGGACATTGCTATTTAATGCAAATTCTGGCATTGACCTTGCGTCTATTCCAGAAACCAAGTCTGCTATCAGTTTTAATAATGCAGGTTCCAATAGAATTGGAATTAACTTCACAGACGGAGACGGTAACCTAAGAATAGCTAGAACTGATATTAATCAAGACTGGGCAAGCGGAGACGTAGATATTCTTTTAGGGTCTAATAATTATAAAGTTTGGCATGCCGGCAACGATGGTTCAGGTTCAGGGCTGGATGCGGATTTATTAGATGGCAAACATTTGCATCAAGGACAATGGGATTCAATATGTTACATCGGAGGAGACGGCGTATTGGAAATAGGAAAGTATATAGATTTCCATGAAGAGCAAGGTATAAGTAGTGACTTTTCTTGCAGAATAATGGCACAAGGAGATTATCAAAATACATTACACCTACCTACCTCAAGTGGGATTCTTGCTACACTTGAAGACAATGTAGCGTCCTCCACCAAGCTGCAAACCCCTCGCACAATATTCAGCAAGCCTTTTGACGGTACAAGCAATGTAACAGGAGGGGCTAAATTTAATGGTATCTGCATTGAGACAGATAACAACGGAAATGATAGCGGAAGAAGTAATGAGATAAATAATTATGTCGATAGTCTGCGCTTACAGCATGCTTCATCTAATAACTTAATTTGCTGTATGGGTGGTGGCATGGTCGGCATAGGCACTATATCGCCAGCTTACACACTTCATGTAAATGGAGTCATTTATGCAAAGGATGGTTTCAGGGAGACATCAGACATTCGTAAGAAGAAAGTATTAAACTCTCATACTGTGAGTCTAGATGATATGGCTTATGCTGATCTATTTGACTATACTCTTATAGATGATGAAAAAGAAATAGTAAGAGTAGGTACCAATGCTCATTACTGGCTTGATAAATTACCTCAAGTTGTTACCAAAGATAATGACGAATATCTATCTTTAAACTATGGAGTATTAGGAACTGTATGTGCTTTATCTGTATCTAAATATGTTAAGCAATTAGAAGACAGAGTTACTCTATTAGAGAATAAAATAGCCTCATTATAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b77cdd7168a5e3235561a470ea0943b610879667f3ac47f7ac389927e267987d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6439
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank