Protein

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Genbank accession
ARB06830.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MAAGKAEGIIGKSLLKENNLSDLSDINASRQTLLIDSLVQDGAHTFLYSHNRLYRFVMRDDGLIVLQKNIKGDGISWESLPLSIIAGGTGADTLEGARYNLGVDRLFQNSGETVLYSPNKNKYLTIPDGGDHWGVYDATTEQWLPLGIQFGGTGAKDANGIRNNIGLGEKHAPKFLSLTVENETENATTANAGIYHSKLKNTQGEDIGSSQSYFETQLGVGKHTIGVFHNNLSHYYQFNENGTFSGAKSISLAPGAGIYVDGNERNASQLFSIMNPPINTWTGVSRYNWYDDYAIAGLIRRDDTHVESFGIELYQAGIQAYMHKFYPDGRTHSAQYTGKTQQMGWDDPNYWGNALVWGEIIANNDGGWAPGLSWGTQSTGGYPIRATWGLIPQGNNAWPFCSLRLRGDGNFFCNFQFQPASNDITTWSSSGNFIFQKAANSDRDLKHDIIYTDGKESYDRVMQWLPTMFKYNGSNIQRFGLIAQDLLKIDPEYVKLIPGGDIFADVIGVNEEGEEYVDRQIVVDKADDTLALDNNVIMADLACAFRYQADKVNKLEQELTELKKLVSELIKPNNS
Physico‐chemical
properties
protein length:575 AA
molecular weight: 63744,14140 Da
isoelectric point:5,04534
aromaticity:0,10957
hydropathy:-0,43635

Domains

Domains [InterPro]
DC_0195
STR
6–575
DC_0195
IPR030392
CHP
441–559
IPR030392
IPR030392
CHP
441–495
IPR030392
ARB06830.1
1 575
Architecture
STR
STR 6-575
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARB06830.1
1 575
Domain Start End Length (AA) Confidence
N-terminal 1 107 107 0,9328
Central domain 108 306 200 0,1632
C-terminal 307 575 268 0,9691
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-107
Central
108-306
C-terminal
307-575

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiLLS
[NCBI] 		1965465 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus LLS
Host Escherichia coli O157
[NCBI] 		1045010 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB06830.1 [NCBI]
Genbank nucleotide accession
KY677846.1 [NCBI]
CDS location
range 116 -> 1843
strand +
CDS
GTGGCTGCTGGAAAAGCTGAAGGTATTATTGGTAAATCGTTACTAAAAGAAAATAATCTTTCAGATCTGTCGGATATTAATGCTTCTCGTCAGACGCTCCTTATAGACTCACTTGTGCAGGATGGGGCTCATACTTTTTTATACTCGCATAATAGATTATATAGATTTGTTATGAGAGATGATGGGCTTATTGTACTCCAGAAAAACATAAAGGGTGATGGTATCTCATGGGAATCTCTTCCATTATCAATTATTGCTGGTGGTACTGGAGCGGATACACTTGAAGGTGCTAGATATAATTTAGGAGTTGATAGGCTGTTTCAGAATTCTGGTGAAACAGTTTTATATTCCCCAAATAAAAACAAGTATCTAACCATTCCAGATGGTGGGGATCATTGGGGCGTTTATGATGCTACAACCGAGCAATGGCTACCCCTAGGTATTCAATTTGGTGGTACGGGTGCTAAGGATGCGAATGGTATTAGAAATAATATAGGACTCGGGGAAAAACATGCGCCAAAGTTCCTAAGTCTTACTGTTGAAAATGAAACTGAAAATGCAACTACTGCAAACGCAGGTATATACCATTCAAAATTAAAGAATACACAAGGCGAGGATATTGGTTCTTCTCAGTCTTACTTTGAAACTCAACTTGGCGTAGGAAAGCATACTATAGGTGTATTTCATAATAACTTGTCTCACTATTATCAGTTTAATGAAAATGGTACTTTTTCAGGAGCGAAAAGTATTTCCTTAGCTCCTGGGGCTGGTATTTATGTAGACGGAAATGAGCGAAATGCGTCGCAATTGTTTTCAATTATGAATCCACCAATCAACACATGGACTGGTGTAAGTCGTTACAACTGGTATGACGATTACGCTATCGCTGGTTTAATCAGAAGAGACGATACACACGTTGAATCTTTTGGAATAGAATTGTATCAAGCAGGGATACAGGCCTATATGCACAAGTTTTACCCGGACGGCAGAACGCATTCTGCCCAATACACAGGGAAGACACAACAGATGGGCTGGGACGATCCTAACTATTGGGGTAATGCTCTTGTTTGGGGTGAGATTATTGCTAACAATGACGGTGGTTGGGCACCGGGTCTTTCATGGGGAACCCAGTCCACCGGTGGCTATCCTATTCGCGCAACTTGGGGTCTTATTCCACAGGGAAATAATGCATGGCCTTTTTGCTCGTTAAGGCTTCGTGGTGATGGTAATTTTTTCTGTAACTTCCAGTTCCAGCCAGCATCAAATGATATAACTACATGGTCATCAAGTGGAAATTTCATTTTTCAAAAGGCCGCTAACTCTGACAGAGATTTAAAGCACGATATCATCTATACAGATGGAAAAGAAAGCTATGATCGCGTTATGCAGTGGCTGCCTACAATGTTTAAGTACAATGGAAGCAATATCCAGCGATTTGGTTTAATAGCCCAAGACCTACTAAAAATAGACCCGGAATATGTAAAATTAATTCCTGGCGGGGACATCTTTGCAGACGTTATAGGTGTTAATGAAGAAGGTGAAGAATATGTAGACCGTCAAATTGTTGTTGATAAAGCGGACGATACATTAGCTCTTGATAATAACGTAATTATGGCTGATTTAGCTTGTGCATTTCGTTATCAAGCTGACAAAGTTAACAAACTTGAGCAAGAATTAACTGAACTGAAAAAACTTGTGAGCGAGCTCATTAAGCCAAATAACTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
548b0e88f02ffcac5282ac79fc339b33787359036f0373b043bab2f5c2197b2b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7419
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of new bacteriophage phiLLS Rubi-Rangel,L., Amarillas,L., Carrillo,H. and Leon-Felix,J. 2013-05-17 — GenBank