Protein

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Genbank accession
UJD04682.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNLLSDPVSGIRRRPPGEIVWESAIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTVINSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPSTTVDNTGRIDPSTTGFFYVKSAAFQKRWNITVTSAGVDYSGDYSAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAGMSNQSRVDQEQDLPAQLPAEADGAMCRVGTASSETAWYQFDYGTCTWSEVGAYGSITNITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSSVLTPTNASISITSTYDCDGRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVRVQDGVFTVPAVLRPVGWADNYKEELILTYLPSDAMGPTEVGIKGIAGENTLRVVRGVPDGTYVIGRRYRSTLTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDAPRDVNWSGELTGILMNSKELTLGQTLRMDLATIIVPCRTNADTTEVTLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85769,04150 Da
isoelectric point:4,94166
aromaticity:0,08524
hydropathy:-0,22863

Domains

Domains [InterPro]
DC_0058
STR
1–786
DC_0058
IPR058003
TTP
5–786
IPR058003
UJD04682.1
1 786
Architecture
STR
STR 1-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD04682.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9918
Central domain 145 343 200 0,1857
C-terminal 344 786 442 0,1071
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-343
C-terminal
344-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp2
[NCBI] 		2863270 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD04682.1 [NCBI]
Genbank nucleotide accession
MZ634339 [NCBI]
CDS location
range 29018 -> 31378
strand +
CDS
ATGGCTACGTCCCTAGAGGGTACCATTCAGAGCTTGCTGCAGGGTGTTTCCCAGCAGGTTCCGAGAGAGCGCCAACCAGGACAGCTGGGGGCGCAGCTGAACCTGCTCAGCGACCCAGTTTCCGGTATCCGCCGCAGGCCTCCGGGCGAGATTGTCTGGGAGAGCGCGATTGATAATCCAGGGCTCGATTCCCTGTTCACGGAATACGTAGAGCGTGGAACTGATGGCAGGCACCTGCTTATTAACACCAGCAACGGTAATTGGTGGCTGCTAGCCAAGAACGGAAAGACCGTTATTAACTCAGGCAACGACCCGTACTTCGTTACCACGGTAGGCCAGACCTCTTTGCAGACGGCAAGTATTGCAGGGCTGACTTATATACTGAATACGGAGATGGCTCCAAGCACAACCGTGGACAACACTGGGCGCATCGACCCCAGCACCACTGGGTTCTTCTACGTTAAATCTGCAGCATTTCAGAAACGTTGGAACATCACCGTTACCTCGGCTGGGGTGGATTACTCCGGGGACTACTCCGCCCCGGCTGCTGGTAGCACTAGCGGTAACGCTGAGGAGGTATCTGGTGCTTACGTTGCTCAGCAACTGCGAGACTCTCTTGTAGCGAACGGGTTGCCCGCTGGGAACGTGAGCGTACGCGGCGCGTACCTGTTCTTCTACGGGCTGAGCAACTGCGTGGTATCCTCTGACGCTGGCGATACTTACGCAGGGATGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCGCAGCTCCCGGCAGAAGCTGATGGGGCAATGTGTCGTGTAGGTACAGCTTCTTCCGAGACAGCATGGTACCAGTTCGATTACGGTACCTGTACCTGGTCTGAGGTGGGGGCGTACGGTAGCATCACCAATATTACGAATATGCCCAGAGAGCTCGCCGCGGATGACAACATCATCGCGCGGGATTGGGAGGGGCGTTTAGCGGGCAACGACGATAACAACAGTAATCCTGGGTTCGTCGAGAACGGTTACATCACCGGCATTGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGTGGTAGCTCCGTGGATATGTCAGCCTCTGGTCTGTATCAGCGCTTCTACCGCTCTACCGTGACTTCCCTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCCCAGGATTCTGTGTACCGCACAGCTGTGCAGTTTAACCGGGACCTGGTCCTGTTTGCTAATAGCATGCAGGCGGTTGTGCCGGGTTCGTCAGTACTTACGCCAACTAACGCAAGTATTAGTATTACCAGCACCTACGACTGTGACGGCCGTGTTACCCCGGTAATGGCGGGTCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCAGGTATACTGGAGCTAATCCCATCACCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCGGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCACGCATGTCTGGGGAGCGTAATAGCCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTGGAGGATGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGCAACAAGCTTTTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGTTCGGAGTACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCGAGTACAGGACGGGGTGTTTACTGTTCCGGCGGTACTGCGCCCCGTCGGGTGGGCTGACAATTACAAGGAAGAGCTTATCCTAACGTACCTACCCAGCGACGCTATGGGGCCTACCGAGGTTGGCATCAAGGGGATTGCTGGGGAGAACACCCTGCGGGTTGTGCGCGGCGTACCTGATGGTACCTACGTAATCGGGCGGCGTTACCGCAGTACGTTAACGCTAACTACGCCTATCCTGCGGGACCAGAATGACAAGCTAGTGGGGAGTGGGCACGTGCGCCTGCTGCGCCTGGATGTAGCGGTGCGTAACTCTGGACACTTCGATGTACAGGTACTAGACGCCCCACGGGACGTCAACTGGAGTGGGGAACTAACCGGTATCCTGATGAACTCAAAAGAGCTAACGCTCGGGCAGACCTTGCGTATGGACTTGGCCACTATTATCGTACCGTGCCGTACTAACGCAGACACAACCGAGGTGACGCTGTTTACTGAGGGTTCTATGGAACTGAACGTGCTGGATATATCGTACATCCTGCGCTACAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aadbc46bff01661b5870052cee29cbf0410126392b43e1964f29d8adb7bd0d1f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3088
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank