Protein

View in Explore
Genbank accession
YP_004782195.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARHFGVKQSEVVYFSVGAVLSGYKVIYDKGTQRAYSLPANIGSGVTAISLSPAGVLVHSAGSVDLGALAVTRKEYVTLPDTFTSGSVIQTKNELLTHNGTQYRWAGGLPKSVPLNSTPVSAGGISPTAWVIANDELIRQELNNGLIPPVGSTSVYDVPGIVVNTTTDNRAAAYAFPGKIFIPNGVTIRCNLLPDDDVRKFVGEGKLIVKNQWYAKDHTFDIAASMNGNNKTVNDEIYCAFRDQTFCRIGIIGDSITDGAWGKQDWSSPPTNSDGDLDAPSTYNHSLSGGSHSWTEHWMNGLLLTQSRRSGETIYQSANCSVSGKKLSDGWGYRNFDRGFFGNTRYGAEAPRVCILAMGWNDSSASIATYRDQIDKFVRKAWGYGCAVGIVTVNDNDSVRMAFELSTKKYMADKLGVEYFNLGPNLTSASSRNEQTGYYYYVKKDGTWDTTHPQELGQMAMGNAMYMQTLGNKYCRRVRPGDMLTQAAVENYWDCVGYPSGTHYAPQYVPVSGAPALNVFRFLSKCVTNENVTMTTMVWCEEEGMTVSLLEPWTNAAVVGQSHNIRVESPVGKALFESGEYQERNTQINAYRTVLNGKTAMSYFGGGKTLTTYMGRLRKGLNFIRYIIDGSPTDAYFPMLKFGSYKTDGVKLPMVRLSKEPNMTRPAPVMKQSNANDYGVFGEVLSGTQFSKTADSHLYNGASVGYLAVPRGLKKNTYIALNYNPLTNVGVLVGVNAAGNMCIGTFNNANPTDWVVFGDTTREDKGFKVWEYTSSSTGAHTFTVESDDGTATTSAFSTTVATSGYVGLYNPSASSQLFTLEYSMTIGNVG
Physico‐chemical
properties
protein length:851 AA
molecular weight: 92601,90300 Da
isoelectric point:7,84498
aromaticity:0,10693
hydropathy:-0,28813

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR049297 SSF52266 DC_2010
DC_1596
STR
1–358
DC_1596 IPR054153 IPR055017
IPR040775
RBD
91–153
IPR040775 IPR036514
cd00229
ENZ
270–487
cd00229
YP_004782195.1
1 851
Architecture
ATT
STR
RBD
ATT 1-155 | STR 156-493 | RBD 494-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004782195.1
1 851
Domain Start End Length (AA) Confidence
N-terminal 1 184 184 0,9835
Central domain 185 383 200 0,7520
C-terminal 384 851 467 0,6749
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-184
Central
185-383
C-terminal
384-851

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_G7C
[NCBI] 		1054461 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus G7C
Host MDR Escherichia
[NCBI] 		561 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004782195.1 [NCBI]
Genbank nucleotide accession
NC_015933 [NCBI]
CDS location
range 61262 -> 63817
strand -
CDS
ATGAACGAAATGTTCTCACAAGGCGGTAAGGGTTCAACAGGAATCCTAACCAATAAACAAGCAATAGCACGTCACTTTGGGGTTAAACAATCTGAGGTTGTTTACTTCTCAGTGGGTGCTGTACTAAGTGGTTACAAAGTCATCTACGACAAAGGGACACAGCGTGCTTATTCCTTACCTGCTAACATTGGTTCAGGTGTTACTGCTATAAGCCTTAGTCCTGCTGGTGTATTAGTTCACTCTGCTGGTAGCGTGGACTTAGGTGCATTAGCTGTTACTCGCAAAGAATATGTAACTTTACCGGATACGTTTACTTCTGGCTCAGTTATACAGACCAAGAATGAATTGCTTACTCATAATGGCACGCAGTATCGCTGGGCTGGTGGGTTACCCAAGAGCGTACCACTTAACTCTACCCCGGTTAGTGCAGGTGGTATTTCTCCCACTGCATGGGTTATTGCTAATGATGAATTAATACGACAAGAATTAAACAATGGTCTAATTCCTCCTGTTGGTTCTACTTCCGTATATGATGTTCCTGGTATTGTTGTTAATACTACTACGGATAACCGTGCAGCTGCTTATGCTTTCCCCGGTAAAATCTTTATCCCTAATGGTGTTACCATTCGTTGTAACTTACTACCCGATGATGATGTCCGTAAGTTTGTTGGGGAAGGCAAACTTATTGTTAAAAACCAGTGGTATGCAAAGGACCATACGTTTGACATTGCTGCTTCAATGAATGGTAACAATAAAACCGTTAATGACGAAATATACTGTGCATTCCGTGACCAGACATTTTGTCGTATCGGTATCATTGGCGATTCCATTACTGATGGTGCATGGGGTAAACAGGATTGGAGTTCTCCGCCAACTAACTCAGATGGTGACTTAGATGCCCCAAGTACATACAATCATTCTTTATCTGGGGGTTCCCACTCATGGACTGAACACTGGATGAATGGCTTGTTGCTCACACAGTCTCGTCGTAGTGGTGAAACTATTTACCAATCAGCTAACTGTTCCGTATCTGGTAAGAAGTTATCCGACGGTTGGGGTTATCGTAACTTCGACCGTGGGTTCTTCGGTAACACACGCTATGGTGCAGAAGCTCCTCGTGTATGTATCCTTGCAATGGGTTGGAATGACAGTAGTGCTAGTATCGCTACCTACCGTGACCAGATTGACAAGTTTGTTCGTAAAGCATGGGGCTACGGTTGTGCCGTTGGTATTGTAACAGTCAACGATAATGACTCAGTACGTATGGCATTTGAGCTTAGTACTAAGAAGTACATGGCAGATAAACTAGGTGTTGAGTATTTTAACTTGGGACCAAATCTGACTAGTGCAAGTAGCCGCAATGAGCAAACTGGGTACTACTACTATGTTAAGAAGGATGGAACCTGGGATACTACTCACCCACAAGAACTTGGACAAATGGCTATGGGTAATGCGATGTATATGCAGACCCTTGGTAATAAGTACTGTCGTCGTGTTAGACCGGGGGATATGCTCACTCAGGCTGCTGTAGAAAACTATTGGGATTGTGTAGGGTATCCTTCCGGTACTCACTATGCACCACAGTATGTACCTGTATCTGGTGCTCCTGCTCTGAACGTATTCCGTTTTCTGTCTAAGTGTGTAACTAATGAAAATGTAACCATGACCACAATGGTATGGTGTGAAGAAGAAGGTATGACTGTATCCCTTCTAGAACCATGGACTAATGCTGCCGTTGTTGGGCAATCCCACAACATCCGTGTTGAGTCTCCTGTGGGCAAAGCATTGTTTGAGTCCGGTGAATACCAAGAACGTAATACTCAAATTAATGCCTACCGCACCGTGCTTAATGGCAAGACTGCCATGAGTTACTTTGGGGGTGGCAAAACCCTTACTACCTATATGGGGCGATTACGTAAAGGTTTGAACTTTATCCGTTATATCATTGATGGTAGTCCTACTGATGCTTACTTCCCTATGCTGAAGTTTGGTTCTTACAAAACGGATGGGGTTAAGCTGCCGATGGTTCGTCTTAGCAAAGAACCTAACATGACCCGTCCTGCTCCAGTAATGAAGCAGTCTAACGCCAATGACTATGGTGTATTTGGTGAAGTTTTGTCTGGTACTCAGTTCAGTAAAACCGCAGACTCTCACCTTTATAATGGTGCATCTGTAGGTTATCTGGCTGTACCGAGAGGTCTTAAGAAAAACACCTATATTGCACTTAACTATAACCCACTTACTAATGTTGGTGTGTTAGTCGGTGTGAATGCTGCAGGTAATATGTGCATCGGTACGTTCAACAATGCTAACCCAACTGACTGGGTAGTATTTGGTGATACTACTCGTGAAGATAAAGGCTTTAAAGTATGGGAATATACTTCCTCCTCTACTGGTGCTCATACCTTTACTGTAGAGTCAGATGATGGCACGGCAACTACGTCTGCATTCTCTACTACTGTAGCTACCTCTGGTTATGTAGGATTATATAACCCGTCTGCTTCTAGTCAGTTATTTACTCTTGAGTACAGCATGACTATTGGTAATGTGGGCTAA

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Isolation and characterization of a novel indigenous intestinal N4-related coliphage vB_EcoP_G7C Kulikov,E., Kropinski,A.M., Golomidova,A., Lingohr,E., Govorun,V., Serebryakova,M., Prokhorov,N., Letarova,M., Manykin,A., Strotskaya,A. and Letarov,A. 2012 22341309 GenBank
Isolation and complete genome sequencing of vB_EcoP_G7C bacteriophage, a novel member of 'N4-like viruses' genus Kulikov,E.E., Kropinski,A.M., Golomidova,A.K. and Letarov,A.V. 2011 — GenBank