Protein

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Genbank accession
QHB43410.1 [GenBank]
Protein name
major tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MHLPNGSQIFVESNRGSEIQATAVSNAKDPVFTVASGGTAYKKGDYVIITASSWGKLIDRVMRVKANGEETSVTLEGVDTTDQNVFPTGGTASFAKIDAWTEIPCVQDLSQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNAIYPLLRAADESGEVTALRMYVPKAKEMRCWAGVLSFNEIPQTTVNEMETVSLSVSLKGRFTFLPSQVA
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24123,68430 Da
isoelectric point:4,66486
aromaticity:0,09545
hydropathy:-0,27500

Domains

Domains [InterPro]
DC_0037
ATT
1–51
DC_0037 IPR014918
QHB43410.1
1 220
Architecture
ATT
TAS
ATT 1-51 | TAS 52-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFP17
[NCBI] 		2692510 Uroviricota > Caudoviricetes > Drexlerviridae > Hanrivervirus > Hanrivervirus SFP17
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB43410.1 [NCBI]
Genbank nucleotide accession
MN432485 [NCBI]
CDS location
range 28796 -> 29458
strand -
CDS
ATGCATTTACCAAATGGATCGCAAATTTTCGTTGAGAGCAATCGTGGCAGCGAAATCCAAGCAACGGCAGTATCAAACGCTAAAGATCCTGTATTCACCGTTGCATCTGGTGGCACTGCGTACAAGAAAGGTGATTATGTGATCATAACTGCGTCCTCTTGGGGCAAGCTGATTGATCGTGTTATGCGTGTAAAGGCTAACGGTGAAGAAACAAGCGTGACTCTTGAGGGTGTTGATACTACCGATCAGAACGTGTTCCCGACTGGCGGCACTGCATCTTTTGCCAAGATTGATGCATGGACTGAGATCCCTTGCGTTCAGGATTTGTCGCAGGACGGCGGAGAACAGCAATATTACACTTATCAGTGTTTGGCGGACGACCAGGAGCAGCAGTTACCTACCTATAAGAGCGCCGTTTCTCTGACCTACACTTTTGCGCACGAATACGATAACGCGATCTATCCGTTACTTCGTGCAGCAGATGAATCCGGTGAAGTGACCGCGCTTCGCATGTATGTACCGAAAGCGAAAGAGATGCGTTGCTGGGCTGGTGTCCTTTCGTTTAACGAGATCCCACAAACGACCGTTAACGAAATGGAAACTGTTTCCCTGTCTGTATCCCTGAAAGGTCGATTCACCTTCCTACCTTCTCAAGTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
696a54ca95fc8f530782f9585293c48d8f74f489721a5692d1f1804a96f5468b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9567
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of a Novel Bacteriophage SFP17 Infecting Shigella flexneri Lee,J.-H. and Lee,J.-S. 2016-12-30 — GenBank