Protein

View in Explore
Genbank accession
USZ80548.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSRVLTLWAGMTGTVLPFAGAAAPADWLLCAGQAVSRTTYATLFAVIGTTYGAGDGSTTFNLPDLRGRVAGGKDDMGGTAAGRLTAAGAGVAGTTLGATGGTQVHSLTTAQMPAHNHAVTDPGHAHGITDPTHAHGVYDPGHTHQYYRVTTGNGQGSDVGTANNHILTNTAAAATGISIYASGTGISVNGAGTGISTQNNGSGGAHNNTQPTIVLNHIIKI
Physico‐chemical
properties
protein length:221 AA
molecular weight: 21953,97480 Da
isoelectric point:6,85395
aromaticity:0,04977
hydropathy:-0,04480

Domains

Domains [InterPro]
DC_1155
STR
5–221
DC_1155
SSF88874
STR
8–221
SSF88874
IPR037053
ATT
9–66
IPR037053
IPR011083
ATT
13–69
IPR011083
USZ80548.1
1 221
Architecture
ATT
STR
ATT 5-69 | STR 70-221
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USZ80548.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 117 117 0,0456
Central domain 118 210 94 0,0088
C-terminal 211 221 10 0,9959
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-117
Central
118-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage MQ-4
[NCBI] 		2961710 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia liquefaciens
[NCBI] 		614 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USZ80548.1 [NCBI]
Genbank nucleotide accession
ON853583.1 [NCBI]
CDS location
range 16581 -> 17246
strand +
CDS
ATGAGCCGAGTTTTAACGTTATGGGCAGGAATGACCGGCACAGTTCTGCCGTTCGCGGGGGCTGCGGCCCCTGCTGATTGGTTGCTGTGCGCCGGGCAGGCGGTAAGCCGCACCACTTACGCCACGCTGTTTGCGGTGATTGGCACCACCTACGGTGCCGGTGACGGTTCCACAACCTTCAACCTGCCCGATCTGCGCGGGCGTGTTGCTGGTGGCAAGGATGACATGGGCGGCACGGCTGCTGGCCGACTGACCGCCGCAGGCGCAGGCGTGGCAGGCACCACGCTGGGCGCTACCGGCGGCACGCAGGTGCATTCACTGACAACGGCGCAGATGCCAGCGCATAACCACGCCGTCACTGACCCCGGCCACGCCCACGGCATTACCGACCCTACGCACGCGCATGGAGTGTATGACCCCGGCCACACGCACCAATACTACCGGGTAACCACCGGCAACGGGCAGGGTTCTGACGTAGGCACGGCCAACAACCACATCCTGACCAACACGGCGGCAGCGGCGACCGGCATCAGCATCTATGCTTCTGGAACCGGCATCAGCGTTAACGGCGCTGGAACCGGCATCAGCACGCAGAACAACGGTTCAGGCGGTGCGCACAACAACACCCAACCAACCATTGTGCTGAACCACATTATTAAAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
de2dedc94c52af97791adf5eaaa02c78e1c25867cb5af62d6be1b60e58d3cc3a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7180
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50