Protein

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Genbank accession
WMM95601.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MASRNSNLVTHTIPNLVAGVSQQFTEARFETQVEEMENCVPSIARGVIRRNPASAITHTYTTLTNSAYVYTYDRGTGTEQYAIEIDGNGNWYVHNVNTGALVSSGYNAYFTVPAGSTPKNSFEAVTIGDYTFIANKTKTVAMNPITAEQSGENLQAWEDRMVHWIKKTTAVQTANKSETTNTVNSSNVVTASTTDSGIRLEGYDYTLKYGTTSRTIQGLKDTRSGVTQYDQLQAADIAAQLAAQFSGLTAKDTFLYGTNVNLDWSYEDSFGNEASLLVHKVVDNAADLPAVMPITFDKIVKISGAFATEYDDYWMKYSAADKEWAECVAPDIETELNPATMPHVIVRKSLTEFVCTSYDYDEMIAAGIGGDDIGWKSKKAGDDVTLENPSFIGKQIVNIFFHKNRLGFLTKESIILSETADYGNFFATTAQVLPDDDPIDLFVATTDVTVLRDAVSTAGTLILFSDDSQFVLTTATNGPLTPSNATINTASNYTYSSNAAAVANKVYFISESGGYSQLFAYRLTEGLQTTEADHLTSHIPSYIPQNVSQVVGHSTLGYVFVHSEETPNTIYVLNTFVKGGQDAQNAFHKWTFGFDVIHMSIINNKLILHALEEDGSTELLEMSLEIPGDITAITYQDEGYGNYTSSVKLSKFHVKDAKGNGTNRGRTQIRTIQMATKDNSRIMCSIYNRKFSTNPDQTNWMIKTGFWVDSGEWVDTNVWKDAYPLYIRNYYDDDTISVMSNSNDVQIEIKNNDEAPTTGFELSTVDIEALFFQRAMRM
Physico‐chemical
properties
protein length:778 AA
molecular weight: 86049,54140 Da
isoelectric point:4,73886
aromaticity:0,10540
hydropathy:-0,30090

Domains

Domains [InterPro]
DC_0058
STR
1–640
DC_0058
IPR058003
TTP
7–615
IPR058003
WMM95601.1
1 778
Architecture
STR
STR 1-640 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95601.1
1 778
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,5865
Central domain 139 343 206 0,5035
C-terminal 344 778 434 0,4267
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-343
C-terminal
344-778

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-143
[NCBI] 		3072845 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95601.1 [NCBI]
Genbank nucleotide accession
OR420748 [NCBI]
CDS location
range 22954 -> 25290
strand +
CDS
ATGGCTAGTAGAAATAGTAACCTAGTTACTCACACAATCCCCAACTTAGTAGCTGGTGTCTCTCAACAGTTTACTGAAGCAAGATTTGAAACACAAGTAGAAGAGATGGAGAACTGCGTACCTAGTATCGCCCGTGGCGTTATTAGACGTAACCCAGCCTCTGCTATTACCCACACGTACACTACACTAACCAACTCGGCATATGTATATACGTATGACCGTGGTACTGGCACTGAACAGTATGCTATCGAAATTGATGGTAATGGTAATTGGTACGTACATAATGTTAATACTGGTGCGCTTGTCTCTTCGGGGTACAATGCTTACTTTACTGTACCCGCAGGTAGCACACCTAAGAACTCGTTTGAAGCGGTTACTATTGGTGACTACACCTTCATCGCAAACAAAACTAAAACAGTAGCAATGAACCCCATTACGGCAGAGCAGTCAGGTGAAAACCTACAGGCTTGGGAAGACCGTATGGTTCATTGGATTAAGAAGACTACTGCCGTACAGACAGCTAACAAGTCGGAAACTACCAACACAGTTAACAGTAGCAACGTAGTTACTGCGTCTACTACTGACTCTGGTATTCGTCTTGAAGGCTACGACTACACTCTTAAATATGGCACTACTTCTCGTACTATACAAGGTCTTAAAGACACCCGTAGCGGTGTTACTCAGTACGACCAGTTACAGGCAGCAGATATTGCAGCACAGCTTGCAGCACAGTTCTCTGGCCTAACAGCTAAAGATACTTTCTTGTATGGAACTAACGTAAACCTTGATTGGTCTTACGAAGATTCGTTTGGTAACGAAGCAAGTCTGCTTGTACACAAGGTAGTGGATAACGCAGCAGACCTTCCAGCAGTTATGCCTATTACTTTCGATAAGATTGTAAAGATTTCGGGCGCTTTTGCAACCGAGTATGATGACTACTGGATGAAGTATAGTGCAGCAGATAAAGAATGGGCAGAGTGTGTAGCTCCTGACATTGAGACTGAGCTTAACCCTGCGACTATGCCCCACGTTATTGTACGTAAGTCTCTTACTGAGTTTGTTTGTACGTCATACGACTACGATGAAATGATTGCTGCTGGTATTGGCGGCGATGACATTGGCTGGAAATCTAAGAAAGCTGGTGATGATGTTACTTTGGAAAATCCTAGCTTTATTGGTAAGCAGATTGTTAATATCTTCTTCCATAAAAACCGTCTAGGCTTCCTAACCAAAGAGTCTATCATTCTCTCTGAGACTGCTGACTATGGTAACTTCTTTGCAACTACAGCACAGGTTCTACCAGATGATGACCCTATTGATTTGTTTGTTGCTACTACTGATGTTACGGTTCTGCGTGACGCTGTTAGTACTGCTGGTACTCTTATTCTGTTTTCAGATGATTCCCAGTTTGTACTTACTACAGCTACCAACGGCCCTCTGACACCAAGCAATGCTACAATCAACACTGCATCTAACTACACGTACAGCTCTAACGCTGCTGCTGTTGCCAACAAGGTATACTTTATATCTGAGTCTGGCGGCTACAGTCAGTTGTTTGCTTACCGTCTGACCGAAGGTCTACAGACTACGGAAGCAGACCACCTAACCTCGCACATTCCGTCTTACATTCCTCAGAACGTATCTCAGGTTGTTGGACACAGTACGCTTGGTTATGTGTTTGTACATTCAGAAGAAACACCTAACACTATCTACGTGCTTAATACGTTTGTTAAAGGTGGACAGGACGCTCAGAACGCTTTCCATAAATGGACGTTTGGTTTTGACGTTATTCATATGTCTATTATCAACAACAAACTTATTCTTCATGCACTAGAGGAAGACGGCTCGACTGAGCTTCTGGAGATGTCTCTGGAAATTCCGGGCGACATTACTGCCATCACCTACCAAGATGAGGGGTACGGTAATTATACGTCTAGTGTTAAGCTGTCTAAGTTCCATGTTAAGGATGCAAAGGGTAACGGTACTAACCGTGGACGTACTCAGATTCGCACAATTCAGATGGCTACTAAAGATAATAGCCGCATTATGTGTAGTATCTACAACCGTAAATTCTCTACTAACCCTGACCAGACTAACTGGATGATTAAGACAGGCTTCTGGGTAGATAGCGGTGAGTGGGTTGATACTAACGTATGGAAAGACGCATACCCATTGTACATTCGTAACTACTATGATGATGATACTATCTCAGTTATGAGTAACTCAAACGATGTACAGATTGAGATTAAAAACAACGATGAAGCTCCAACAACGGGCTTTGAACTTTCAACTGTGGACATAGAAGCACTCTTCTTCCAACGAGCTATGAGAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c8eb59d2f8d9fd222b088136860ea22017dba264195f1b53730ab265a304a45
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2923
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50