Protein

View in Explore
Genbank accession
UJD05288.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKDFDFEALQNIANQVKADSEAAGASSAAAAASEGAAKTSETNSKASEQAALTARQQAGSARDQTQSLYNQTVDLVAGVQAPDKLPTSPGSSRAWMKIANVKNAGQSNCFAQFIIGGGANFGSANLPVDIFSISGRGLPDTLTSNNIDANFTQCALIAAANSTSRLKLGVVKNTDGSFDVYLLSPNGYFPVMWLNRLNVQSNNGLITGPIIDRTGYSWITTEPAGIVYNSPSDYLMANDSTIPRTNVANTFSQPQAISVPGGNATLTLNGAVVRANNNNAIVYSIPEDGQGMYFRPNGDMNNAKQVVFDAANFTVTGLNATFSNAVTMLSTLRVNGASNLSGGVDVTASQKLPLKETTATTGIGVNFIGNSATECSFGIENTAGGSAVFHNYTRGASNSVTKDNQLLGGYGSRPWLGSDYTAHSNAALHFLGAGDASASNNGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGAMHSDFGLVRSFETLNAAVPKFNAPTNQDGRGLKIVADGSPEINMIAPRGSTTSSPAVRAMWCDGSLGNSDKYIGAAQAWSTFFFGASGHDGEKFDSMRGAVNIQATEGWGKTSTPTRILFETCAAGSTTRTSRWCVDHNGNFIPMGDGGYDIGWGSGRVNNIYAKNGAINTSDGRMKNDVRAMSDPETEAAKAIAKEIGFWTWKEQADMNDVREHCGLTVQRAMEIMESFGLEPFKYGFICYDKWDEKTVVSEYGPANEDGSENPIYKTIPAGDRYSFRIDELNMFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:892 AA
molecular weight: 94766,49010 Da
isoelectric point:5,09729
aromaticity:0,08520
hydropathy:-0,22590

Domains

Domains [InterPro]
DC_0313
STR
1–890
DC_0313
IPR036388
RBD
746–891
IPR036388
cd10144
CHP
760–882
cd10144
IPR030392
CHP
760–819
IPR030392
IPR030392
CHP
760–890
IPR030392
UJD05288.1
1 892
Architecture
STR
STR 1-891 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD05288.1
1 892
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,7628
Central domain 244 442 200 0,5633
C-terminal 443 892 449 0,8950
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-442
C-terminal
443-892

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp15
[NCBI] 		2863265 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD05288.1 [NCBI]
Genbank nucleotide accession
MZ634346.1 [NCBI]
CDS location
range 8186 -> 10864
strand +
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGCCCCGGAGCGACGATTATGTTTTTGTCGTCACCAATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGTGATTACGCGATCCTGTTAAGCGACTCTCTAACCGTTGACGGACTGGCGCAAGATGTTGCTGAAACTTTGCGCTACTACCAGTCGCAAGAAACCGTAATTGCGGATGCGGTCGAGTTCTTTAAGGATTTTGATTTCGAAGCACTTCAAAATATTGCTAATCAGGTGAAGGCAGACTCAGAAGCTGCGGGCGCAAGCTCTGCGGCGGCTGCTGCGTCAGAAGGGGCGGCGAAAACTTCAGAAACTAACTCTAAGGCCTCGGAGCAAGCGGCGCTAACAGCACGACAGCAAGCAGGGTCAGCAAGGGATCAGACTCAAAGTCTTTATAACCAGACTGTCGATCTTGTTGCTGGCGTTCAAGCGCCGGATAAGCTGCCAACCTCGCCAGGAAGCTCGCGGGCGTGGATGAAGATTGCCAACGTTAAGAACGCTGGACAGTCAAACTGTTTTGCGCAATTTATTATTGGTGGCGGCGCTAACTTTGGTTCGGCAAATCTCCCGGTAGATATCTTTTCTATTTCTGGCCGTGGTCTTCCCGATACGCTAACAAGTAATAATATTGACGCCAACTTTACTCAATGCGCACTGATTGCCGCAGCAAATAGCACATCGCGTTTGAAGTTGGGGGTTGTGAAAAACACCGACGGATCTTTTGATGTTTATTTGCTCTCGCCTAACGGTTACTTTCCCGTTATGTGGTTAAACCGTTTGAACGTGCAATCTAATAATGGGTTGATTACCGGGCCGATTATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAGCCGGGATTGTATATAATTCACCATCTGATTACTTGATGGCTAACGATAGCACGATCCCGCGCACCAACGTAGCTAACACGTTCAGTCAACCACAAGCGATCAGCGTCCCTGGAGGAAACGCTACGCTAACCCTGAACGGTGCCGTAGTTCGGGCCAATAACAACAACGCGATCGTTTACTCCATCCCGGAAGACGGTCAAGGAATGTACTTCCGCCCGAATGGCGATATGAACAACGCGAAGCAGGTTGTTTTTGATGCGGCAAACTTTACCGTTACCGGGTTGAATGCCACTTTCAGCAATGCTGTTACGATGTTAAGCACGCTCCGCGTCAATGGTGCATCCAACCTTAGCGGCGGTGTTGATGTTACCGCTTCGCAGAAATTGCCACTGAAGGAGACGACCGCGACAACCGGGATTGGCGTTAACTTTATCGGCAACAGTGCAACGGAGTGTTCTTTCGGTATTGAGAATACGGCTGGCGGGTCTGCTGTGTTCCATAACTATACGCGCGGTGCGTCTAACAGCGTGACGAAGGATAACCAGCTTTTGGGTGGTTATGGCTCACGACCGTGGTTAGGGTCGGACTACACAGCGCACAGTAACGCCGCCTTGCACTTCTTGGGCGCTGGCGATGCATCGGCAAGCAACAACGGTGGCTGGATTCGATTGCTTGTCACCCCCAAAGGTAAGACGATTAGCGATAGGGTTCCGGCGTTCAGGCTGTCAGATAACGGAGATCTCTGGCTTGTTCCGGATGGGGCCATGCACTCAGATTTTGGTTTGGTGCGTAGCTTTGAAACGCTTAACGCGGCAGTTCCGAAATTCAACGCTCCAACCAATCAGGATGGTCGAGGGCTGAAAATTGTGGCGGATGGTTCGCCGGAAATTAACATGATTGCGCCTCGCGGTTCTACTACATCATCACCTGCGGTTAGGGCAATGTGGTGCGATGGTAGCCTGGGTAACTCGGATAAATATATCGGCGCTGCACAGGCATGGTCTACTTTCTTCTTTGGGGCGTCGGGCCACGATGGGGAAAAATTCGACTCAATGCGCGGAGCGGTTAACATTCAGGCTACGGAGGGGTGGGGGAAAACCAGCACGCCAACGCGAATTTTGTTCGAAACATGCGCGGCAGGCTCAACTACGCGAACCTCTCGCTGGTGCGTTGACCACAACGGGAACTTCATCCCTATGGGCGATGGCGGTTATGATATTGGATGGGGTAGCGGTCGAGTCAATAACATCTACGCTAAAAATGGGGCAATCAACACCTCAGACGGTCGGATGAAGAACGACGTTCGAGCCATGAGTGATCCTGAAACCGAAGCGGCCAAAGCCATTGCGAAGGAGATCGGGTTCTGGACGTGGAAAGAGCAAGCCGATATGAACGACGTGCGCGAGCACTGCGGTTTGACCGTACAGCGTGCTATGGAGATCATGGAAAGTTTTGGTCTTGAGCCGTTTAAATATGGCTTCATCTGTTATGACAAGTGGGATGAGAAAACGGTGGTTTCAGAATATGGGCCAGCGAATGAAGACGGGTCGGAAAACCCGATCTACAAAACCATCCCGGCTGGTGATCGCTACTCGTTCCGCATTGATGAGTTAAACATGTTTATCGCAAAAGGATTTGAAGCGCGGTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a52427be408d68bac6fc008f09a96c337d46c1f6d6ca599afee23bdd6fa17eb9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3220
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank