Protein

View in Explore
Genbank accession
UEP18759.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 0,62
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MPSLFTFANNISTTLAGSISSGATSLTLSSAANLPSSIPVGKVLVITLNDAATRQQFEVIYATAISGATLSGLLRGQENTSAQAWSTGDYAYCSPTMGQMQAFGQLGDNNTWTGNNTFNNPVVVAGAPAGSATAAVNQGQFESQLGQGGWKEYPDPNSPSGFFVEQWGYVSVPPGNSNIFNFPKQFPVACINIIGCQQRSATNTAVFLGWDISSATQLIVSNGDSTTHNGYYMARGY
Physico‐chemical
properties
protein length:237 AA
molecular weight: 24852,21220 Da
isoelectric point:4,68174
aromaticity:0,10549
hydropathy:-0,07975

Domains

Domains [InterPro]
DC_0891
STR
1–234
DC_0891
G3DSA:2.60.40.3940
RBD
142–237
G3DSA:2.60.40.3940
IPR054075
RBD
159–237
IPR054075
UEP18759.1
1 237
Architecture
STR
STR 1-237
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage vB_Sb_QDWS
[NCBI] 		2880893 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella baltica
[NCBI] 		62322 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UEP18759.1 [NCBI]
Genbank nucleotide accession
OK094664.1 [NCBI]
CDS location
range 16288 -> 17001
strand -
CDS
ATGCCTTCTCTCTTCACGTTCGCCAACAACATCAGTACCACGTTGGCGGGGTCGATCTCGTCCGGAGCAACATCTCTCACTCTGTCAAGCGCGGCCAACTTGCCGTCGTCGATTCCAGTCGGGAAAGTCCTCGTCATCACGCTCAACGACGCAGCGACCCGCCAGCAGTTCGAAGTGATCTATGCGACCGCGATCTCCGGCGCGACGCTCAGTGGCCTGCTGCGCGGGCAGGAGAACACGAGTGCGCAGGCGTGGTCCACCGGCGATTACGCCTACTGCTCGCCGACGATGGGTCAGATGCAGGCATTTGGCCAACTTGGCGACAACAATACATGGACTGGAAACAACACATTTAACAATCCGGTCGTTGTCGCCGGCGCTCCCGCCGGCAGCGCGACTGCAGCGGTCAATCAGGGGCAATTCGAGAGTCAACTCGGGCAGGGCGGATGGAAGGAATATCCGGATCCCAATAGCCCGTCTGGGTTTTTCGTCGAGCAATGGGGGTATGTCAGTGTGCCGCCTGGGAACAGCAACATTTTTAACTTCCCCAAACAATTCCCTGTTGCGTGCATCAACATCATCGGTTGCCAGCAGCGAAGCGCGACAAATACAGCGGTCTTTCTCGGATGGGACATTTCTTCGGCAACCCAGCTGATCGTGTCGAATGGCGATTCAACAACTCACAACGGGTATTACATGGCGCGAGGGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3cf259b2201fc838b44bdc3dd0fe4090c563f3c3832574ad6e3f14451b6ed648
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8647
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of a novel Shewanella phage vB_Sb_QDWS Tan,L., Xuan,G., Lin,H. and Wang,J. — — GenBank