Protein

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Genbank accession
QGZ17843.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MANTTFSGPVISKNGFIGTGPGSTVALTANTSLTVNAHAGRILLTQDADGIFTLPSILTTANSASAGSTDYNNANNVGASFYFYVDTTATDVQIVTDGTDKFVGAAMIAVDDGAKKAFFPAASNDVLSMNGTTTGGITGSVIQVTALQSAEYLVHNTLILGSGSIVTPFSDT
Physico‐chemical
properties
protein length:172 AA
molecular weight: 17412,10800 Da
isoelectric point:4,24953
aromaticity:0,07558
hydropathy:0,25349

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC027P
[NCBI] 		2686457 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17843.1 [NCBI]
Genbank nucleotide accession
MN698241 [NCBI]
CDS location
range 35594 -> 36112
strand +
CDS
ATGGCAAATACTACGTTTTCAGGACCGGTCATTTCTAAAAATGGCTTTATAGGTACTGGACCAGGTTCAACTGTAGCATTAACAGCTAACACATCATTAACTGTAAATGCTCACGCAGGAAGAATCTTATTAACACAAGACGCGGATGGTATCTTTACTTTACCTTCAATTCTTACAACAGCTAATTCTGCATCAGCAGGATCAACTGATTACAACAATGCAAATAACGTTGGTGCAAGTTTCTATTTTTACGTAGACACAACTGCAACTGATGTTCAAATTGTTACTGATGGAACTGATAAGTTTGTTGGTGCTGCAATGATTGCAGTAGATGATGGAGCTAAAAAAGCTTTTTTCCCAGCAGCAAGTAATGATGTTTTATCAATGAATGGAACTACAACTGGTGGTATCACTGGTTCTGTTATTCAAGTAACTGCATTACAATCTGCAGAGTATTTAGTACACAATACTTTAATTCTTGGATCAGGTTCAATCGTAACACCATTTAGTGATACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6bf56ea75272b1ddffac22b88549083c2a27d6652402affc2c463959c0686da3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank