Protein

View in Explore
Genbank accession
XNO93709.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDENDAVVQLAGKGVPFLDTSGTLSVDGTTTLKDNVTISPNKAISFETTDLSGEITRHIVGKCATNDGWYIGAGGTSNSGILEIGTIDDGAETIQFVQRGAGNVEARKLVLLDGSGNTTLPGDLRLSTNKTVKINSGSTLVLEMGVGSNDVYIKNQRGTGVLQLTNDSNLTFRNSQVYYAMSGRGPGKSGTLLTNVENNRQAWQYTISAATATTSRWVKVATIKHPGMASSQLDLMISGGIDSGHGKHYVDFITLSGRNLTSWSTNNLDNWVEWRRVGSPSKTNVPEYYVVKNDAATDADASFDFYAKVPRYSNDLYVTVLNTSGYNGQSSGSVIIYETGQDTGATGPSGSILVSMKQIFDSYAKPDFGDTTGTLPVNRGGTGATNVGDARNNLGLRTAAVRDVGESSGNVMEVGAFGIGGNGKSLVDITSDVDLMTRLKALGGTVFRANTASGYTGAPYYSHGTGFYGRASDTMAALNIDYATGNVRVFAINDSGLASGRVNSNVLYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLTVPNLHASGPGTASVYVNAGSGNAHVWFRTDGNERGVIWATPNTADLGQINIRAKTTGGTSAGDFSFRSDGRLDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDITTGDNKQVSKTGDTMTGNLTINANLKVENPNGTFVDLGSENSDKYSRLTLARKVGDGAAVAMLKITPEGYVQFGYQTAVATPSPTKYIRVKPDGLDVEGDLVFNQTYRGTEEAVDISDKTIDLNSLVIKRTDPGTRQLYKCVSSGGGSNISNKPTSDGNFVLEVLSLRKVSDTDWSCKQTFTTKNGGVEGTYIRYAQNGSWSAWKEVVAGVQPINLGGTGATSVAAARNNLGVGEGQTVSFGNLVTNDLTANGNARLVGRLNLGSTSATGVLRANETGAVVLGSASGQNIHIRAGSPDTSSGETRFEPNGNVLVGGAITVSGNLQVNGEATMGRSLIVSQNIKNTNDNSFILMGKDSDLGFVKKSGAGSKLVFASGKTFTVAKSSATAISNPASETYTDVFKVDADGNQTVYGNAQVNRQLTVSSSATVNGIINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGRLTITGDQLKTTSLWTTGDAAVNGVLTVDGKARFNQEFSVSTSVNVQNDGNSHLFFRKADGTEKGLLWADDPGNVSIRASGASGPVWNFWNSGSCQFPGAISNYNGISSTTNYPGGGIGSYLNTSGLVTRFSNGAYASLYFQEYVGNYHQAILNVNGYGQDNSFYFRAGGDFFCTRNGSFDNVEIRSDRRAKSDIKVIENALEKVESLSGNTYELHNTSGGTTRSAGLIAQEVQEILPEAVTQDNEEDGGMLRLNYNSVIALLVESVKELSAEVKELKAEIEELKSK
Physico‐chemical
properties
protein length:1476 AA
molecular weight: 155414,09840 Da
isoelectric point:5,86007
aromaticity:0,07114
hydropathy:-0,31762

Domains

Domains [InterPro]
DC_1942
ATT
4–616
DC_1942 cd19958 DC_0246
DC_0468
STR
483–1006
DC_0468 IPR030392
IPR030392
CHP
1376–1431
IPR030392 Coil
XNO93709.1
1 1476
Architecture
ATT
STR
RBD
ATT 4-616 | STR 617-1006 | RBD 1082-1476
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO93709.1
1 1476
Domain Start End Length (AA) Confidence
N-terminal 1 1054 1054 0,1253
Central domain 1055 1253 200 0,3548
C-terminal 1254 1476 222 0,8921
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1054
Central
1055-1253
C-terminal
1254-1476

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth21
[NCBI] 		3384114 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO93709.1 [NCBI]
Genbank nucleotide accession
PQ657794.1 [NCBI]
CDS location
range 153198 -> 157628
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCTTTGAATACACATGGGCGTACTCTTGCCATTTATACTAAAGATGAAAATGATGCCGTAGTACAGCTCGCCGGTAAAGGGGTTCCTTTCTTAGATACCTCCGGAACTCTTAGCGTTGATGGAACTACTACATTAAAAGACAACGTAACTATTTCTCCGAATAAAGCAATTAGTTTTGAAACTACTGATTTGAGCGGTGAAATAACTCGTCACATCGTTGGTAAATGTGCTACTAATGATGGTTGGTACATTGGTGCCGGCGGTACAAGCAACAGTGGTATTCTTGAAATCGGTACTATTGATGATGGCGCTGAAACTATTCAATTCGTACAACGCGGTGCAGGCAACGTTGAAGCCCGAAAATTGGTCTTGCTTGACGGCTCGGGTAATACGACTCTTCCTGGCGATTTAAGATTATCTACCAATAAGACTGTTAAAATTAACAGTGGAAGCACTCTTGTTCTTGAAATGGGTGTAGGCTCTAACGACGTCTATATTAAAAACCAAAGAGGCACGGGTGTTCTTCAATTAACTAATGACAGTAATTTAACGTTCAGAAATTCACAGGTGTATTACGCTATGAGCGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACGAATGTAGAAAACAATCGTCAAGCCTGGCAATATACTATTTCTGCTGCAACTGCCACAACCTCGCGCTGGGTTAAAGTAGCTACAATTAAACACCCTGGAATGGCTTCTTCACAGCTGGATTTAATGATTAGCGGTGGTATTGATTCTGGACACGGCAAGCACTACGTTGATTTTATCACGTTATCTGGGCGAAATTTAACATCTTGGAGCACTAACAATTTAGATAACTGGGTTGAATGGCGTCGAGTTGGTTCTCCTTCTAAAACAAACGTTCCAGAGTATTACGTTGTTAAAAATGATGCTGCCACGGATGCGGACGCTTCATTTGATTTTTACGCTAAAGTTCCTCGATACTCCAATGACCTTTATGTCACAGTACTAAACACTTCTGGGTATAATGGACAAAGCTCTGGTAGTGTAATTATCTATGAAACTGGTCAAGACACCGGTGCTACTGGACCGTCTGGAAGTATTCTTGTTTCAATGAAACAAATTTTTGACAGTTACGCAAAACCAGATTTCGGCGATACTACCGGTACTCTTCCGGTTAACCGAGGTGGTACAGGTGCTACTAACGTAGGAGACGCTCGAAATAACTTAGGTCTTAGAACTGCGGCTGTTCGTGATGTTGGTGAATCTAGCGGAAACGTGATGGAAGTTGGTGCCTTTGGTATTGGTGGTAACGGAAAATCACTAGTAGATATTACTTCTGACGTTGATTTAATGACTCGCCTTAAGGCTCTTGGTGGTACAGTGTTCAGAGCCAACACAGCAAGTGGTTATACCGGGGCTCCTTATTACTCCCATGGCACCGGGTTTTACGGAAGAGCTTCTGACACAATGGCTGCGCTTAATATAGATTATGCAACTGGTAACGTCAGAGTATTTGCTATAAACGATAGTGGTTTAGCAAGTGGAAGAGTAAATTCTAATGTTCTCTACGGCACAGCAAATAAGCCATCTAAGGCTGATGTCGGACTTGGTAATCTGACAAACGATACCCAAGTCAAGAAAGCTGGCGACACCATGACTGGTGATTTAACTGTTCCTAATTTACATGCTTCCGGCCCGGGTACTGCATCAGTATATGTTAATGCAGGAAGCGGAAATGCTCATGTGTGGTTTAGAACAGACGGTAACGAACGCGGTGTAATTTGGGCAACTCCAAATACAGCGGACTTAGGACAAATTAATATTCGTGCAAAAACTACTGGAGGCACTTCTGCTGGTGATTTTAGCTTCCGTTCTGATGGCCGCCTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGAGCAGCAATGCTAACCAAAGACGGGAATATTACCTCTGGTTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCTATTAAAAATGACATCACCACTGGCGATAATAAGCAAGTAAGCAAGACTGGTGATACCATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTTGAAAATCCTAATGGAACATTTGTTGATTTAGGTTCAGAGAACTCTGATAAGTATAGCAGATTAACCCTTGCTCGTAAAGTTGGCGATGGCGCTGCTGTAGCAATGCTTAAAATTACTCCTGAAGGATACGTGCAATTTGGTTATCAAACTGCAGTTGCTACTCCATCTCCTACTAAGTACATCCGAGTTAAACCTGATGGTCTTGATGTAGAAGGGGATTTAGTTTTTAATCAGACCTATCGCGGCACTGAAGAGGCAGTGGATATTTCTGATAAGACCATTGACCTTAATAGTCTTGTCATTAAAAGAACCGACCCAGGTACTCGTCAGTTATATAAATGTGTATCATCTGGCGGCGGAAGTAATATATCGAACAAACCTACCTCTGATGGCAACTTTGTTCTTGAAGTTCTGTCTTTACGCAAGGTTTCTGATACCGATTGGTCATGTAAGCAGACCTTTACTACAAAGAACGGTGGTGTTGAAGGTACATATATTCGCTACGCGCAAAACGGTTCATGGTCCGCATGGAAAGAGGTTGTTGCTGGTGTTCAACCGATCAATCTAGGCGGTACTGGAGCAACGTCTGTAGCAGCTGCTCGTAATAACCTCGGCGTTGGTGAAGGACAAACAGTATCATTCGGTAATTTAGTTACCAACGATTTAACTGCAAATGGAAACGCTAGATTGGTTGGAAGATTGAACCTCGGTTCTACTTCTGCGACTGGCGTATTACGAGCTAATGAAACCGGTGCGGTTGTCTTAGGTTCTGCTAGTGGTCAAAACATCCACATCAGAGCAGGAAGCCCAGATACTTCTTCTGGTGAAACCCGCTTTGAGCCAAATGGAAACGTTTTAGTTGGTGGTGCGATTACAGTCTCAGGAAACTTGCAAGTAAATGGCGAAGCCACTATGGGCAGAAGCTTGATCGTTTCTCAAAACATAAAGAATACTAACGATAATAGTTTTATTCTGATGGGAAAAGACTCTGATTTAGGTTTCGTTAAAAAATCTGGCGCAGGTTCTAAACTGGTCTTTGCTTCAGGAAAAACATTCACGGTTGCTAAATCATCAGCAACTGCTATAAGTAATCCGGCTTCGGAGACTTATACTGATGTGTTTAAAGTTGATGCAGATGGAAACCAAACTGTTTATGGAAATGCCCAAGTTAACAGACAGTTAACTGTTTCTAGTTCAGCAACTGTTAATGGTATTATTAATGCCAACGGCGGTATTATTGTTCCTACTACCAAGTATGTGCAAATTGCCGATGCTCCTACGCAGAATAACCAAGCCACCAACAAGAAATATGTTGATGACAAGGTTGCTTCTGCTATTAGTAATGCTGGCGATACTTATCTCCCATTAGCAGGTGGTACTGTAACTGGGCGGTTAACAATTACAGGTGATCAGTTAAAAACTACCTCTCTGTGGACTACCGGAGACGCTGCGGTTAACGGCGTTTTAACTGTTGACGGAAAAGCTAGATTTAATCAAGAGTTCAGTGTATCTACTTCAGTTAATGTTCAGAACGATGGTAACAGTCATTTGTTCTTCCGTAAAGCAGATGGTACGGAAAAAGGACTTCTTTGGGCTGATGATCCTGGTAATGTTAGTATAAGAGCCAGCGGTGCTTCTGGACCAGTATGGAATTTCTGGAACAGTGGTTCTTGCCAATTCCCAGGTGCTATTAGTAACTATAACGGAATTAGCAGCACTACTAATTACCCTGGTGGTGGTATCGGCTCATATTTAAACACATCAGGATTAGTAACTAGATTTAGTAATGGTGCTTATGCTTCGTTATATTTCCAAGAATATGTTGGGAATTATCACCAGGCTATTCTTAACGTCAACGGGTATGGCCAAGACAATAGCTTTTACTTTAGAGCTGGCGGTGACTTCTTCTGTACCCGTAATGGTTCTTTTGATAACGTAGAGATTCGTTCTGACCGCAGAGCTAAATCTGATATTAAAGTTATTGAAAACGCCTTGGAAAAAGTTGAGTCTTTAAGCGGTAATACTTATGAACTTCATAACACTTCTGGCGGTACTACTCGTTCTGCTGGGTTGATTGCTCAAGAAGTTCAAGAAATCTTACCGGAAGCAGTTACTCAAGATAATGAAGAAGATGGCGGTATGCTTCGTCTGAATTATAACTCAGTAATTGCACTTCTTGTTGAATCGGTTAAAGAACTTTCAGCTGAGGTCAAAGAACTTAAAGCAGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
314decb9f93ebdc247f0e257802f8eebaf24963e7f443d3d194f7537f1bc0d04
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank