Protein

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Genbank accession
WHM52757.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MGYPPVGKGRGGTAPAGRGQPGPPGHDGITPRIGSNGHWFIGNTDTGVSAKGDTDDRAIISVSQTGNTLTFTHGDGAKHTVSFTPGSDIDPTQLKSEIERTELVMAQDGKDIVALKKSLGDLTHHVDSLTGVYSYRGQTPPTSYPADLKSAYFINLHNSNGPQTMYIPDEQSLGNDGTVLFINNENDTAPINVNSYPGIALDNASNAIVGPLQFHMWVKHGNDWITAATGYIPSSLDDVIHRVAATMTGQLHTKNQIVDIDNQWLANPTTQSTLDKIMTQLGYTKGSGGGTQPHPSTVKVHYGTSDGYPADFTGEVGEFAPHQNLVVNHLDQNPKHVWIAVPASMKSKVVGVVANNGMPAQWGSQDISVKGEQWTVFLSPTPLADDHISFSIKWSV
Physico‐chemical
properties
protein length:396 AA
molecular weight: 42323,47460 Da
isoelectric point:5,71479
aromaticity:0,07323
hydropathy:-0,41439

Domains

Domains [InterPro]
G3DSA:2.60.120.220
ATT
14–71
G3DSA:2.60.120.220
DC_0845
STR
33–396
DC_0845
WHM52757.1
1 396
Architecture
ATT
STR
ATT 14-71 | STR 72-396
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_1601
[NCBI] 		3038270 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHM52757.1 [NCBI]
Genbank nucleotide accession
OQ719603.1 [NCBI]
CDS location
range 59170 -> 60360
strand -
CDS
ATGGGATACCCACCAGTAGGTAAGGGAAGAGGCGGTACAGCGCCAGCAGGAAGAGGACAGCCTGGGCCTCCAGGCCATGACGGCATCACTCCACGAATAGGGTCGAACGGTCACTGGTTCATTGGCAATACCGATACAGGCGTAAGCGCTAAAGGAGACACGGACGACAGGGCAATAATCTCCGTATCTCAGACAGGAAACACGCTTACGTTTACGCACGGAGACGGAGCCAAACACACGGTTTCGTTCACTCCAGGGTCTGATATTGACCCAACACAATTAAAATCAGAGATAGAGCGTACCGAGCTTGTCATGGCGCAGGACGGCAAAGACATAGTCGCGCTCAAGAAAAGCTTGGGAGACTTGACTCACCACGTAGACAGCCTAACTGGGGTATATAGTTACCGAGGACAGACGCCTCCGACCAGTTACCCTGCAGATCTAAAGTCTGCTTACTTCATCAACCTGCACAACAGTAACGGTCCTCAGACTATGTATATCCCTGATGAACAGAGCTTAGGCAATGACGGCACAGTTCTGTTCATAAATAACGAAAACGACACAGCACCAATCAACGTAAACTCTTACCCTGGTATAGCACTAGACAACGCCTCTAACGCCATAGTCGGACCTCTCCAATTCCATATGTGGGTTAAACACGGCAATGACTGGATTACGGCGGCCACGGGTTACATACCCTCTAGCTTAGACGATGTGATCCATCGAGTGGCCGCCACCATGACAGGGCAACTTCACACCAAAAATCAGATAGTAGACATAGACAACCAATGGCTTGCTAACCCTACTACTCAATCGACGCTAGATAAAATCATGACTCAACTTGGTTACACAAAGGGCAGCGGTGGCGGAACTCAACCTCACCCGTCAACCGTAAAAGTGCACTACGGTACATCAGACGGCTATCCGGCCGACTTCACTGGCGAAGTCGGCGAGTTTGCTCCTCACCAAAATCTAGTAGTCAACCATCTTGACCAAAACCCTAAGCATGTGTGGATAGCTGTTCCAGCATCTATGAAGTCTAAAGTAGTCGGTGTAGTAGCTAACAACGGCATGCCTGCGCAGTGGGGAAGCCAAGACATTAGTGTTAAAGGCGAACAGTGGACTGTGTTTTTAAGTCCTACGCCTCTAGCAGACGACCATATCTCTTTCAGCATTAAGTGGAGTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
033f6c4335fd297b997181b00844a7610b3fdcb743ae6ddcb9f41a96a586ce6b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7166
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50