Protein

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Genbank accession
QVQ56204.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGAFGGMIITNKGRALQAKAQTGIELKYTRIKVGDGKLGGQSIPTLNNLISAKKSLDIKKLEVRPDGKAVVGTMLSNAGLQSGFYFREIGVFAQDPDVGEIMFCYANSGDNAEYIPPEGGPDVIEKYIDAVTIIQNAQNVSAVIDGSLVYATNKEMEEKVAKALNEAKAYTDQKVDDIDLSNITPESIGAAKQADLDAHATDAVKHITAAERTSWNAKETTDGAQEKANQAEANAKNASLPRSGGTITGGLVVNGALTVQSRNVLEEIDNVKSSVVDGKGKVAGAINDKGGGPVSANSTFDQLAAAITGMQEARGNLALTSAFFDMLNSYTGISVMFINKDNNIVLIRQTSSGDPPRFQSELHEVSPNGTVVRAVHLGAPQALPPRSFAVGDDVVLVTTEDLAGNGFYEVYDHAGTLISKSQVSYLDVLRTHAITRDGSIFIAQSGNPVRVVNQSGTAYFSMPDGSGNAYEFVFLSKTKLYVARQDSPTSRKHTLITRDGLSFSYEMAARGTGITGIVNFLGAHAYRD
Physico‐chemical
properties
protein length:528 AA
molecular weight: 56057,22750 Da
isoelectric point:5,52756
aromaticity:0,06629
hydropathy:-0,20720

Domains

Domains [InterPro]
DC_2008
STR
1–354
DC_2008
IPR022225
ATT
7–153
IPR022225 Coil IPR011042
SSF101898
RBD
333–487
SSF101898
QVQ56204.1
1 528
Architecture
ATT
STR
ATT 1-153 | STR 154-513 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVQ56204.1
1 528
Domain Start End Length (AA) Confidence
N-terminal 1 317 317 0,9429
Central domain 318 517 201 0,9615
C-terminal 518 528 10 0,1637
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-317
Central
318-517
C-terminal
518-528

Taxonomy

  Name Taxonomy ID Lineage
Phage Paenibacillus phage Pd_22F
[NCBI] 		2836077 No lineage information
Host Paenibacillus dendritiformis
[NCBI] 		130049 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVQ56204.1 [NCBI]
Genbank nucleotide accession
MZ092003.1 [NCBI]
CDS location
range 30504 -> 32090
strand -
CDS
ATGGGGGCATTTGGTGGAATGATTATCACGAATAAAGGACGTGCCCTGCAAGCAAAAGCGCAAACGGGAATCGAGTTGAAATATACTCGCATCAAAGTCGGGGATGGCAAATTAGGAGGGCAGTCGATACCGACCCTGAACAATCTAATCAGCGCGAAAAAGTCCCTTGATATCAAAAAGCTCGAAGTGCGCCCGGACGGTAAGGCGGTTGTCGGGACTATGCTTTCCAACGCGGGGTTGCAATCAGGGTTTTACTTTAGGGAAATTGGCGTGTTCGCGCAGGATCCCGACGTTGGGGAAATTATGTTTTGCTACGCCAATTCTGGAGATAATGCGGAGTACATCCCGCCCGAAGGTGGACCGGACGTCATAGAAAAATACATTGATGCGGTTACGATCATACAGAACGCCCAGAATGTCAGTGCGGTAATTGATGGCTCCTTAGTATACGCAACCAATAAGGAGATGGAGGAAAAGGTAGCGAAAGCCTTGAATGAGGCGAAAGCATACACCGATCAGAAAGTGGATGATATTGACCTATCTAATATCACGCCCGAATCTATCGGAGCCGCCAAGCAGGCAGACCTGGACGCACACGCGACTGACGCGGTGAAGCATATTACGGCGGCGGAGCGGACGTCATGGAATGCAAAGGAAACTACTGATGGAGCCCAGGAAAAAGCAAACCAAGCCGAGGCAAACGCCAAAAATGCCAGCCTGCCGCGCTCAGGCGGCACAATCACGGGTGGGTTAGTCGTAAACGGTGCGCTGACAGTCCAATCGCGCAACGTCCTTGAGGAGATCGATAATGTAAAGTCATCTGTCGTTGACGGTAAGGGGAAGGTCGCGGGGGCCATCAACGACAAAGGCGGCGGGCCAGTCTCCGCGAATAGCACTTTTGACCAACTGGCTGCTGCAATCACGGGTATGCAGGAGGCAAGGGGCAACCTCGCGCTAACAAGCGCGTTTTTTGATATGCTCAACAGTTATACCGGCATTAGCGTGATGTTTATCAATAAGGATAATAATATCGTACTAATCCGACAAACATCATCAGGTGATCCACCAAGGTTTCAGTCAGAACTACATGAGGTGTCGCCAAACGGAACTGTTGTGAGGGCAGTACATCTGGGCGCTCCACAAGCGCTCCCGCCGAGGAGTTTTGCGGTAGGTGATGATGTTGTGCTTGTTACGACGGAAGACCTTGCAGGCAATGGGTTCTATGAGGTATATGACCATGCAGGTACACTTATATCAAAAAGCCAGGTATCTTACTTGGATGTTCTTAGAACACATGCAATTACTCGGGATGGTTCCATATTCATTGCTCAAAGTGGAAACCCTGTTAGGGTTGTAAACCAATCGGGCACAGCCTATTTTTCAATGCCAGACGGCAGTGGTAATGCCTACGAATTTGTTTTCCTTAGCAAGACAAAATTATATGTGGCGCGACAAGACTCACCGACTTCACGCAAACACACACTTATCACACGGGATGGTTTATCCTTCAGCTACGAAATGGCAGCGAGGGGGACAGGAATTACGGGAATTGTTAACTTTCTTGGAGCACACGCATACAGAGATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0a8f18309e4efcad7e5ab167c5729e4f03984f304a60636271125d80497e6156
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50