Protein

View in Explore
Genbank accession
XQW40800.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYGIWTRPVGPGPAAPADIYIDSGSTFPQLRNRVSGNFSFSGNTCDLPISGWDGSGQIVVVPTGSVVWERYIPPNVTSDVYWITDISVINNSTFRVTMDYNVNGWVFDMAFNVYQIWPRANRNYGITFSNSADYFSISDSGVVGQCIWAWEGDINGSLQIPDIGGFDMSRATVYANWSNGGAGLLYNPSNRVVYVYQNRSHDNGNTNQTGYIGGVRIAVFCDGSGVPTHNGGLNIFSPNGSQCVFSTYRTPFSVEGFMPMSGGNTSLAYPMIPLSYGAGAIRGKASGWYFQHTRSHMMNGSSFGTGFGRMIYSWSSQYDLGGGGALGLSIPILDARKIFRSIQ
Physico‐chemical
properties
protein length:344 AA
molecular weight: 37376,27250 Da
isoelectric point:6,39839
aromaticity:0,13953
hydropathy:-0,12674

Domains

Domains [InterPro]
DC_1434
ATT
1–40
DC_1434
IPR045604
STR
37–316
IPR045604
XQW40800.1
1 344
Architecture
ATT
STR
ATT 1-40 | STR 41-316 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQW40800.1
1 344
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0041
Central domain 11 209 200 0,0157
C-terminal 210 344 134 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-344

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage YW01
[NCBI] 		3414236 Viruses >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQW40800.1 [NCBI]
Genbank nucleotide accession
PV018828 [NCBI]
CDS location
range 19996 -> 21030
strand +
CDS
ATGGCATATGGAATATGGACACGCCCGGTTGGTCCGGGTCCAGCGGCACCTGCTGATATTTACATCGATAGTGGTAGCACATTCCCTCAACTCAGAAATAGAGTCAGTGGGAATTTCTCTTTTAGTGGAAATACCTGTGACTTGCCTATAAGTGGTTGGGATGGTAGTGGTCAGATAGTTGTAGTTCCAACAGGGTCTGTTGTTTGGGAGAGATACATACCTCCTAACGTAACGTCTGATGTGTATTGGATAACGGATATATCTGTTATTAATAACTCAACCTTCAGAGTTACTATGGACTATAATGTAAACGGTTGGGTATTTGATATGGCTTTTAATGTGTATCAAATATGGCCTAGAGCTAACAGGAATTATGGAATCACATTCTCCAACTCTGCTGACTATTTCTCAATATCCGATTCTGGGGTTGTTGGTCAATGTATTTGGGCTTGGGAGGGTGACATAAATGGTTCTCTTCAAATACCAGATATTGGTGGTTTTGATATGAGCCGAGCAACTGTCTACGCGAATTGGAGTAACGGTGGAGCAGGGCTGCTATACAATCCATCCAATAGGGTTGTTTATGTGTACCAGAACAGGTCTCATGATAATGGTAACACAAACCAAACAGGATACATTGGTGGTGTTAGAATTGCCGTCTTCTGTGATGGTTCTGGAGTACCAACCCACAATGGTGGTTTAAATATCTTCTCTCCAAATGGGTCTCAGTGTGTATTTTCTACATATAGAACCCCTTTTAGTGTTGAGGGATTTATGCCTATGAGTGGCGGTAACACATCTCTGGCCTATCCAATGATACCACTATCTTACGGAGCAGGAGCAATAAGAGGCAAGGCTAGTGGTTGGTATTTTCAACACACAAGATCTCACATGATGAATGGCTCTTCTTTCGGTACAGGTTTCGGAAGGATGATTTACTCTTGGAGTAGTCAATATGATTTAGGAGGGGGTGGTGCCCTCGGGTTAAGTATTCCAATATTAGATGCTAGAAAGATATTCAGGAGTATACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9a61ee67de7d3b8e2e1f9a7ed8bd102ed903fc5dc8a28a8bd39671880c26c330
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8105
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of three Escherichia coli Bacteriophages Isolated from Activated Sludge in Domestic Wastewater Treatment Plants Nittami,T., Fujii,Y., Wein,Y., Motoyama,K., Sasaki,M. and Batinovic,S. 2025-09-11 — GenBank