Protein

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Genbank accession
YP_009850914.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MSNTNQFPYAFAGTKAKMPYLGAGYIAGEAPPPLVPDHPDGRTYVDYQIKSLTVKVLHADSFTPISEVKSLPDGTWRIEGLDPAQRYQVIFQNDTYRDSSNTLYNSFIQDWITAVPMPYVAPPDALNLQVPLLIERWAMPTTIQAYSVNGGVLTTPTFSGSFTGLTVEANKSNVTIRLVPVQQIGTYTLQVSAIKDANTITSGLRTFRIKPQQVDTQQFIRFALLGTAAGPASAISTWNRALNNNGTLTNGAFTADADALSPDYPVSLNSNWSADIISGGMFNDGAGNWVSLNNGYNNGITVEGWFNVSAWPTTDSAMLTSIQTSNAASSLFGLTLLPSKKIGTIMKYGSTNSLRFENSGEADYTLPTNEWFHVLVHVLPSQADGYLYINGQYVDKWSMIKRPTVPTNTNLTVAYVTFLCNNSQGCTGTAVAKCNRVVWTESRFSNQNFTPSKNKYHEYQATVQCATYGVNGIAVNEMSSCDGTWSTTGNTSSRPVFDPAEGVVFPNTTATDGYAWINIQRGYGGVKGSFCMDVWFKPLTAYNGDKNIIQLGNSGSSDGRMHIALNNGKLKSFCAPYTAATGVTMNGTTVLNNNQWYLATLCCDVIQREWRLYLDGTLEASIADPTLAPMALPAVSSLTQIILGGRHPLNNSGSGTIPSFHGVIGATRLTINGPRYYSGFTPTGIGAWDALPARPAA
Physico‐chemical
properties
protein length:697 AA
molecular weight: 75422,86650 Da
isoelectric point:6,45824
aromaticity:0,10473
hydropathy:-0,16485

Domains

Domains [InterPro]
DC_0739
ATT
1–245
DC_0739 G3DSA:2.60.120.200 IPR013320
IPR013320
STR
275–414
IPR013320 IPR013320
G3DSA:2.60.120.200
STR
523–669
G3DSA:2.60.120.200
YP_009850914.1
1 697
Architecture
ATT
STR
STR
ATT 1-245 | STR 266-430 | STR 470-670 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009850914.1
1 697
Domain Start End Length (AA) Confidence
N-terminal 1 217 217 0,8619
Central domain 218 416 200 0,3390
C-terminal 417 697 280 0,8397
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-217
Central
218-416
C-terminal
417-697

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Moby
[NCBI] 		2601680 Uroviricota > Caudoviricetes > Menderavirus >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009850914.1 [NCBI]
Genbank nucleotide accession
NC_048802 [NCBI]
CDS location
range 125437 -> 127530
strand +
CDS
GTGAGTAACACAAATCAATTCCCATACGCTTTCGCTGGCACAAAGGCTAAGATGCCGTATCTGGGTGCTGGATATATCGCCGGTGAAGCGCCACCTCCGCTCGTGCCAGATCATCCAGACGGCAGAACCTATGTTGACTACCAGATCAAGTCTCTGACTGTCAAGGTCTTGCATGCTGACTCGTTCACCCCAATCTCAGAGGTGAAGTCGCTTCCCGACGGCACTTGGCGCATTGAAGGTCTGGATCCTGCACAGCGGTATCAGGTGATCTTCCAGAACGACACCTACAGGGATAGCAGCAACACGCTATACAACTCCTTCATCCAGGATTGGATCACGGCTGTCCCTATGCCCTATGTGGCACCTCCGGATGCCTTAAACCTGCAAGTGCCTCTCTTGATCGAGCGCTGGGCTATGCCGACGACCATCCAGGCTTACTCTGTGAATGGTGGCGTTCTGACCACTCCCACCTTCTCGGGTTCATTCACGGGTCTGACAGTCGAAGCCAACAAGTCCAATGTGACAATCCGTCTAGTTCCTGTGCAGCAGATTGGCACATACACCTTGCAGGTCTCGGCTATCAAAGACGCAAACACTATCACGAGTGGGTTGAGGACCTTCAGGATCAAACCGCAGCAGGTAGACACTCAGCAGTTCATCCGGTTCGCTTTGCTTGGAACCGCAGCTGGTCCGGCTAGCGCCATTTCCACATGGAATCGGGCGCTGAACAACAATGGCACCTTGACAAATGGAGCATTCACAGCAGATGCGGACGCGCTATCGCCAGACTATCCGGTGTCCCTAAACAGCAACTGGTCAGCTGATATCATCTCGGGTGGTATGTTCAATGATGGTGCAGGTAATTGGGTCTCCCTGAACAACGGTTACAACAACGGGATCACGGTCGAGGGCTGGTTCAATGTGTCTGCTTGGCCCACCACTGATTCCGCCATGCTAACGTCGATCCAGACTTCCAATGCTGCGTCATCGCTGTTCGGCTTGACACTCTTGCCGTCTAAGAAGATCGGCACTATCATGAAGTACGGTTCAACCAACTCTCTCCGTTTCGAGAACTCAGGCGAAGCTGACTACACATTGCCTACCAATGAATGGTTCCATGTACTGGTTCACGTTCTGCCCAGTCAGGCAGACGGTTATCTGTATATCAACGGGCAGTATGTGGATAAGTGGTCGATGATCAAGCGCCCAACTGTCCCAACTAACACCAACCTGACCGTCGCCTATGTTACCTTCCTGTGCAACAACAGTCAGGGCTGCACAGGAACCGCTGTGGCCAAGTGCAACAGGGTGGTGTGGACTGAGAGCCGATTCTCTAACCAGAACTTCACGCCGTCAAAGAACAAGTATCACGAATATCAAGCCACCGTCCAATGCGCTACCTATGGTGTCAACGGCATTGCGGTGAACGAGATGAGTTCTTGCGATGGCACATGGAGCACGACGGGCAACACGAGCTCAAGGCCTGTGTTTGATCCAGCCGAGGGTGTGGTCTTTCCGAACACAACAGCAACAGACGGCTACGCTTGGATCAACATCCAGCGCGGCTACGGCGGTGTCAAGGGCTCGTTCTGTATGGATGTGTGGTTCAAGCCCCTGACCGCATACAATGGCGACAAGAACATCATTCAACTCGGCAACTCAGGCTCATCTGATGGGCGTATGCACATTGCCCTGAACAACGGTAAGCTGAAGTCGTTCTGTGCACCATACACAGCGGCAACGGGTGTCACCATGAATGGGACGACAGTGCTCAACAATAACCAGTGGTATCTAGCCACCTTGTGTTGCGATGTGATTCAACGCGAGTGGAGACTCTATCTGGATGGCACGCTTGAAGCTAGCATAGCCGATCCCACATTGGCACCGATGGCATTGCCGGCTGTCTCGTCTCTGACTCAGATCATCTTGGGTGGACGTCACCCACTGAACAACTCAGGTAGCGGCACGATCCCATCATTCCATGGTGTCATTGGAGCAACACGATTGACTATCAATGGTCCTCGCTACTACTCCGGCTTCACGCCTACTGGCATTGGCGCTTGGGATGCACTGCCAGCTCGCCCAGCGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1a562452118237cabb2d5ac38f3ce57ece806e44234e49d5463bfda163c61b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50