Protein

View in Explore
Genbank accession
AQT28106.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSSKDLEFDLDDDWGLDDDLDLDMDFEPQPTALPEGRDAVMQAPKTAAKKAAETIIGESKRRKLILDSLPSDYTVAADAYDTVASEGREVYQEAKRQLTQTKRDLQRTTREAMPMLQRYLPESMTKKIGKWAADDDTTGSYASEDPRESALAAMLSDTFGAQQELSQQERAEDKVQQEIKDQANTIRQDDLNSIISGIRQDTANIVAYNQVSDKYRRKMLEVNWRQYYVLTDLLQTTQTSMEKLIPNTDAIVKNTALPDYAKEEFSEISAAMMKRELIQNLSPGRFAQEYVQQLGQNMRRAIGEFGSTVRDGIGMASMVIPQDDGMDQSVELSPAQQRAQMAQTGAGLAGSMFANKYIAPQVQKMQKYLRDKGEESEFVAGTGAKLRYGMTTLPEYLNDLAKNPDRDGASGASSMLGNLLSSILPQYGGDTAKMQNVTAEELAKVSPWTTRSDITLNEVIPEWLSTIDQSINRLGGVDNGKQTYDWATRSLANESEVQERIAKQAGDNETREYVRKGIDELVEKLSKDSDLSDGAKEDLGKLIDEKIRTVGRFNVADLADNMDGYGSIGTSQHLFDLQQFFSDLRDEGEKRENRVNVEVSDEIRRLRDAIQPVQDTVDEMSKLYGGTMVAKSGIFERKNGSLELNESINDSYREFKPSFEQPKSDVRGMSNIEEVIKGLADTLSRQDSQRTVTANVDMDELKKAVRSSSSRPVAESIRHEDLSELRDNSWFSNEIQFEMYSKLSDALDRQATPQFDMANLASGITGGVREALFGEEEPNLMTALRKISQDKEKGEKSNTLDSLVEQVRDQLVANNLTEEVGTILQVLQDMSERGVPVVEVSGEATEDGDKPGYFGRFGQHVRSGAGKVKRGAGRFKDAVSDRFTKFREKMPSFSVWDKLNGARKGISAGMNSMADAFQGVADIRDEDGNIVLLGRKLKAGMYFDENGNIIKSIKDITGAVYDKNGVVLTEEEVREKKDQFTYYTQKGWKKLSEGIGRLAGGGLRNAFGVPQAVISQVTDIGKKVINKVRTSKDIYVKGESTPRLQHQLMLRGFYVDRNTGKVIRSVADITGPVYNKHKELIISQEDFDNPDIEFVDVDGNPFESLMSRVKSRIKSVVNFGVDKAIAAKDLVKDIASAGAERLGQAKDWALGKIRGDGAEKVGRRSTNKIIDKLDEIYQLLDDRLSKKPSEPEDILDPIDSDKPEPIFGDEDGDGDRDGSFKDIFEKRREAREKKKAERAEARRNRKDKKGDKKPSDGFFSWMANGLGGALKGVMGSLGGVLAGSFAGKALSMLGDGMGSIFNKINPFGGPDIPDGPGKGKKPGLMKRAAGGLWKGAKALGRGAMSVGGFVGRQVLWQGARMAGAAAMAAIGTVSAPVVLGAAAVAAVGYGAYKLATRVVNGPLMRLRMAQYGTEDYSDGKSDEVSKLLYLEDALLKHTSYNNEGISTVKGVNEQATMEMANHFGVKTEDPKAVEMFERWLHGRFIPVFLLWTTRARQNAAGVALNNLDDKSSVEPEAMAKILDGVKLPVDHPVFRVMHSPFGERGMLDTVGGWFGGDDMMSGEAVKEVEAESAEEIADLVKEAKKDKDKKSKSGGIKEAAESELRKGGDGVDPEWYNLSKDQVVKNDDGSVTVGGKNFRDMKTYRKVRDAYRRNDEMKSRSNLSKTQNVDEDFTSMRDPSNLNAVESVRLRAYGLHELSVDKVKLLWELEEAVIVYISATAKSATINIDSAILAERFMAKFGLNAEDVAHRSRWTAWFESRFIPVLMRYVSSLKQHASNANPLMAVVSPATPYMLDVALALVGLRTLFENNEVPIWAVNVSPFKDIQSLNSDPTSVDGNIQFLRENQRRANAMEQTAEEGDGIRMDSTEVKRATKPKSEQSGTSMSRSIIDRVRNGSTMSMDTGGGGSVTTTAGGTYRPDSGGIPIGEMGEGVDPNSAYAKIRLRGNDKESVANMIKEVSKASGVDENLLLTVAMMESSLNPQAGARTSSAKGLFQFINGTWKAELKKHANKYGIPATAGPFDPVANALLGAEYLRSGAKTVEKAMPDGVKAGPADLYLAHFLGPGGASRFLRNLYKTPDRIAAEDFLKPAAANPSVFTDKGRPLSYRAIHEKLQRRAENRFSYVSKYASNPVLKQAPMAATNDDAKSVKEATPNAVGTDEGRTQIAKVKATKDIEKAVTQRTAVEAAPTSIGSSAVPTPAISDVVKTSVKEMETQTPDFDANKYVDQVRQELDARISSKERELSDLKESMAKHNVEENEKSRTLMEKQLSFLEEMAMSLRQLNEKVGFNGSSREAEQKARAHQQERQRMAQTITHDRGPISMARQRT
Physico‐chemical
properties
protein length:2329 AA
molecular weight: 256479,61660 Da
isoelectric point:5,66312
aromaticity:0,06269
hydropathy:-0,59231

Domains

Domains [InterPro]
DC_0124
STR
1–2046
DC_0124 Coil Coil
Coil
Unmapped
89–112
Coil Coil Coil G3DSA:1.10.530.10
IPR023346
STR
1954–2075
IPR023346
IPR008258
ENZ
1956–2044
IPR008258
AQT28106.1
1 2329
Architecture
STR
RBD
STR 1-2075 | RBD 2076-2122 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pVa-21
[NCBI] 		1958921 No lineage information
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AQT28106.1 [NCBI]
Genbank nucleotide accession
KY499642.1 [NCBI]
CDS location
range 142330 -> 149319
strand -
CDS
ATGAGCAGTAGTAAAGATCTAGAATTTGATCTAGATGACGATTGGGGACTCGATGATGACCTCGACTTGGACATGGATTTTGAACCGCAACCCACAGCTCTACCTGAGGGTCGTGATGCGGTCATGCAAGCTCCAAAAACTGCTGCTAAAAAAGCAGCGGAAACCATCATCGGCGAATCTAAGCGCCGCAAATTAATACTCGATAGTCTACCTAGCGATTACACGGTTGCAGCGGATGCATATGATACCGTGGCTTCTGAGGGTCGCGAAGTTTATCAGGAGGCAAAACGTCAGTTAACGCAAACTAAACGTGACCTACAACGTACGACGCGTGAAGCAATGCCAATGCTTCAGCGTTACTTGCCTGAGTCCATGACCAAGAAGATTGGCAAATGGGCGGCTGATGACGATACTACCGGAAGCTATGCAAGTGAAGACCCTCGTGAGAGTGCACTTGCCGCTATGTTGTCTGACACCTTTGGTGCACAGCAGGAACTGTCTCAGCAAGAACGTGCTGAAGATAAAGTTCAACAAGAGATTAAAGACCAAGCGAACACCATTCGCCAAGATGATCTAAACTCAATCATCTCGGGTATCCGCCAAGATACCGCCAATATAGTTGCCTACAACCAAGTCAGTGATAAATATCGTCGTAAGATGTTGGAAGTCAATTGGCGTCAGTACTACGTATTGACTGACCTCTTGCAAACCACTCAGACGTCGATGGAGAAGTTGATTCCCAATACCGACGCAATTGTAAAGAACACCGCATTGCCTGATTACGCTAAGGAAGAGTTTAGTGAAATCTCAGCAGCGATGATGAAACGTGAATTGATTCAGAACTTGTCCCCTGGTCGATTTGCTCAAGAATACGTACAACAGTTGGGACAAAACATGCGACGTGCCATCGGTGAGTTCGGCTCTACCGTACGTGATGGTATTGGCATGGCATCTATGGTCATTCCTCAAGACGATGGAATGGACCAATCTGTAGAACTGTCTCCCGCACAACAGCGGGCTCAGATGGCTCAGACAGGTGCGGGACTTGCAGGTTCGATGTTCGCTAACAAGTACATTGCACCACAAGTTCAGAAGATGCAGAAGTACCTTCGTGATAAAGGTGAGGAGAGTGAGTTCGTTGCAGGTACGGGTGCTAAACTCCGTTACGGCATGACAACTCTGCCTGAATACCTTAATGACTTAGCGAAGAACCCAGACCGCGATGGCGCTAGCGGCGCAAGTAGCATGTTGGGTAACTTGCTGTCAAGTATCTTACCGCAATACGGCGGCGATACCGCGAAGATGCAAAACGTTACTGCTGAGGAACTGGCTAAAGTATCCCCTTGGACTACTCGCAGTGACATTACCTTAAATGAAGTTATCCCTGAATGGCTATCCACCATTGACCAATCGATTAATCGCTTAGGCGGTGTAGATAATGGTAAGCAGACGTATGACTGGGCAACCCGTTCCCTTGCGAATGAGTCCGAAGTCCAAGAACGTATTGCCAAACAAGCAGGTGATAACGAAACTCGTGAATATGTCCGTAAGGGTATTGACGAGCTCGTTGAGAAGTTATCGAAAGACAGTGATTTGTCGGATGGTGCTAAGGAAGACCTTGGTAAACTGATCGACGAGAAGATTCGTACTGTGGGTCGCTTCAATGTAGCCGACCTTGCAGATAACATGGATGGATACGGTAGTATAGGGACAAGCCAACACTTGTTTGACCTACAGCAGTTCTTTTCCGACCTAAGAGATGAGGGTGAGAAACGCGAGAACCGTGTCAATGTGGAGGTGTCTGACGAAATTCGTCGCTTGCGTGATGCTATCCAACCTGTCCAAGATACAGTGGATGAAATGTCCAAGCTGTATGGCGGTACAATGGTTGCGAAGTCTGGCATCTTCGAACGCAAGAATGGTTCATTAGAACTAAACGAAAGTATCAACGATTCTTATCGTGAATTCAAACCATCTTTCGAGCAGCCTAAGTCTGATGTTCGTGGTATGTCCAATATCGAAGAGGTGATTAAAGGACTGGCAGATACGTTGAGTCGTCAAGACAGCCAACGTACTGTAACTGCAAACGTGGATATGGATGAACTGAAGAAAGCAGTACGCTCTAGTTCATCTCGCCCTGTTGCTGAGAGCATTCGACATGAAGACCTAAGCGAGTTACGTGATAACTCATGGTTCTCTAATGAGATTCAGTTTGAGATGTACTCAAAGCTTAGTGATGCGTTAGACCGTCAGGCAACGCCACAGTTTGATATGGCGAACTTAGCATCGGGCATTACGGGTGGTGTGCGTGAGGCACTATTCGGGGAAGAAGAACCTAACCTGATGACGGCTCTTCGCAAGATTTCTCAAGACAAAGAGAAAGGTGAGAAGAGCAATACGTTAGATAGCCTAGTTGAGCAAGTACGTGATCAACTGGTAGCAAACAACCTAACAGAAGAAGTCGGCACAATCCTTCAAGTCCTACAAGACATGTCGGAGCGCGGTGTTCCTGTTGTAGAGGTTTCGGGGGAAGCAACTGAAGACGGTGATAAGCCGGGTTACTTCGGTCGCTTTGGTCAGCATGTCCGTTCAGGTGCTGGTAAGGTAAAACGCGGTGCAGGTCGATTCAAAGACGCTGTTAGTGATCGCTTTACTAAGTTCCGTGAAAAGATGCCATCGTTCTCTGTTTGGGATAAACTCAATGGAGCCCGTAAAGGTATCTCGGCTGGTATGAACAGCATGGCTGATGCATTCCAAGGCGTGGCGGATATTCGTGACGAAGATGGTAACATCGTTCTTCTAGGCCGTAAGCTCAAAGCTGGTATGTACTTCGATGAGAATGGCAACATCATTAAATCGATTAAGGACATTACTGGAGCTGTTTATGACAAAAACGGTGTGGTTCTTACTGAAGAAGAAGTCCGAGAGAAGAAAGACCAGTTTACGTATTACACGCAAAAAGGTTGGAAGAAACTCTCGGAAGGGATTGGTCGCTTAGCAGGTGGTGGTCTTCGTAATGCCTTTGGTGTTCCGCAAGCTGTCATTAGTCAAGTAACTGACATCGGTAAGAAAGTAATCAACAAAGTACGAACCTCAAAAGACATTTACGTCAAAGGGGAAAGTACACCACGACTACAGCATCAATTGATGTTGCGTGGGTTCTACGTTGACCGTAATACGGGTAAGGTTATTCGTAGTGTCGCTGACATTACAGGCCCAGTGTACAACAAACACAAAGAGCTTATCATCTCGCAAGAGGACTTTGATAATCCTGATATTGAGTTTGTCGACGTAGATGGGAACCCATTCGAATCGCTAATGTCGAGAGTCAAGTCACGCATTAAGAGCGTGGTCAACTTCGGTGTAGATAAAGCGATTGCAGCCAAAGACCTTGTGAAAGACATTGCAAGCGCGGGTGCTGAAAGACTGGGACAAGCAAAAGACTGGGCGCTTGGTAAAATCCGTGGTGATGGTGCTGAGAAAGTCGGTCGACGTTCAACCAACAAAATCATCGACAAGTTAGACGAGATTTACCAGTTACTGGATGACCGTTTATCTAAGAAGCCTTCTGAACCAGAAGACATTCTTGACCCAATTGACTCAGATAAGCCTGAGCCAATCTTTGGGGATGAAGATGGTGATGGTGATCGCGATGGTAGCTTCAAAGACATCTTTGAGAAGCGACGCGAAGCAAGGGAGAAGAAGAAAGCGGAACGTGCCGAAGCACGACGTAACCGCAAAGACAAGAAAGGCGATAAGAAACCGAGCGACGGGTTCTTTAGTTGGATGGCCAATGGCTTAGGTGGTGCCCTTAAAGGCGTCATGGGTTCATTGGGCGGTGTACTTGCAGGTTCCTTTGCTGGTAAAGCGCTAAGTATGTTGGGTGACGGTATGGGTTCTATCTTTAACAAGATTAATCCATTCGGTGGTCCTGATATACCAGACGGTCCGGGTAAAGGCAAGAAGCCGGGTCTAATGAAACGAGCCGCAGGCGGATTGTGGAAAGGTGCGAAAGCACTTGGACGTGGTGCGATGTCTGTGGGAGGTTTTGTAGGTCGTCAGGTCTTGTGGCAAGGGGCAAGAATGGCAGGTGCTGCTGCAATGGCAGCGATTGGTACAGTTTCTGCTCCAGTAGTATTAGGTGCAGCCGCTGTGGCTGCTGTGGGGTATGGTGCGTACAAGTTAGCTACTCGTGTAGTAAACGGTCCACTGATGAGACTCCGCATGGCACAGTACGGTACAGAGGACTACAGCGATGGTAAGTCCGATGAGGTATCTAAGCTACTGTATCTGGAAGACGCATTGTTGAAGCATACGTCGTATAACAACGAAGGTATCTCAACCGTGAAAGGTGTGAATGAACAAGCAACTATGGAAATGGCGAATCACTTTGGTGTGAAAACCGAAGACCCTAAAGCCGTAGAAATGTTTGAACGTTGGCTCCATGGTCGTTTCATTCCAGTGTTCCTACTTTGGACAACCCGTGCACGTCAAAATGCGGCGGGTGTTGCGCTTAACAACCTAGACGATAAGTCAAGTGTTGAACCAGAAGCGATGGCTAAAATTCTAGACGGTGTTAAGTTGCCAGTTGATCACCCAGTATTCCGTGTCATGCATTCGCCGTTCGGTGAACGTGGTATGTTAGATACTGTCGGTGGTTGGTTCGGCGGCGATGACATGATGTCTGGTGAGGCTGTGAAAGAAGTAGAAGCAGAATCCGCAGAAGAGATCGCCGACTTGGTGAAAGAAGCCAAGAAAGACAAAGACAAGAAGTCTAAGTCCGGCGGTATCAAAGAAGCTGCTGAAAGCGAACTCCGCAAAGGTGGCGATGGTGTAGACCCTGAATGGTACAACTTGTCTAAAGACCAAGTCGTTAAGAACGACGATGGTTCAGTAACAGTTGGCGGTAAGAACTTCCGAGATATGAAGACTTATCGTAAAGTTCGTGACGCATACCGTCGCAATGATGAAATGAAATCCCGTAGCAATCTGTCTAAAACGCAGAATGTTGATGAAGACTTCACATCAATGCGTGACCCTAGTAACCTTAACGCAGTAGAATCAGTTCGTCTGAGAGCCTACGGTCTGCATGAACTTTCTGTAGATAAAGTTAAGCTGCTATGGGAGTTGGAAGAAGCGGTTATTGTCTACATCTCTGCAACTGCTAAATCGGCAACCATCAATATCGATTCTGCGATATTGGCGGAACGCTTCATGGCGAAGTTTGGATTAAATGCTGAAGACGTGGCACATCGTTCTCGCTGGACGGCATGGTTTGAGTCTCGATTCATTCCTGTCCTAATGCGTTACGTAAGCTCGTTGAAGCAGCACGCGTCCAATGCTAACCCATTGATGGCGGTAGTATCTCCTGCGACGCCTTACATGCTTGATGTTGCGCTAGCGCTGGTAGGTCTACGTACGCTCTTTGAGAATAACGAAGTACCTATCTGGGCTGTGAATGTTTCGCCGTTTAAAGACATCCAGTCGTTGAACAGTGATCCAACATCAGTAGATGGCAACATTCAGTTCCTGCGTGAGAACCAACGTCGTGCTAATGCGATGGAGCAAACTGCTGAAGAGGGTGATGGCATTCGCATGGACTCTACTGAGGTTAAACGTGCGACTAAGCCGAAGAGCGAGCAATCGGGTACATCGATGTCACGAAGCATTATCGACCGTGTGCGTAATGGTTCTACGATGTCAATGGATACCGGAGGTGGTGGTTCAGTCACTACGACAGCAGGTGGAACATATCGTCCTGATTCAGGCGGTATTCCAATTGGGGAAATGGGTGAAGGTGTTGACCCTAACAGTGCTTACGCTAAGATTCGTCTGCGTGGTAATGATAAAGAGTCAGTCGCCAACATGATTAAAGAAGTATCAAAAGCCAGTGGTGTGGATGAGAACCTGTTATTGACTGTAGCTATGATGGAGTCGTCACTTAACCCGCAAGCGGGTGCACGTACCTCATCAGCGAAAGGTCTATTCCAGTTCATCAACGGTACATGGAAAGCAGAACTTAAGAAACACGCTAACAAGTATGGTATTCCAGCAACGGCTGGTCCATTCGATCCCGTAGCTAACGCGCTCTTGGGTGCGGAGTATTTACGTTCTGGTGCTAAGACAGTAGAGAAAGCGATGCCTGATGGTGTGAAAGCTGGCCCTGCTGATTTGTACTTGGCACACTTCTTAGGTCCGGGCGGCGCATCACGCTTCCTACGTAATCTGTACAAGACACCGGATAGAATTGCAGCAGAAGACTTCTTGAAGCCTGCGGCAGCTAACCCAAGCGTCTTTACAGATAAAGGACGTCCGTTAAGCTATCGTGCAATCCACGAGAAGCTACAACGTCGTGCTGAAAACCGATTCTCTTACGTCTCGAAATACGCTTCAAACCCTGTCCTTAAACAAGCACCAATGGCAGCAACCAACGACGATGCCAAGAGTGTGAAAGAAGCCACTCCGAACGCAGTGGGTACAGATGAAGGTCGTACTCAAATTGCTAAGGTGAAAGCGACTAAGGATATTGAGAAAGCAGTAACGCAGCGCACTGCTGTAGAAGCTGCACCAACTTCCATTGGTTCAAGTGCTGTCCCTACTCCAGCTATCTCGGATGTAGTTAAGACAAGCGTGAAAGAAATGGAAACTCAGACTCCAGACTTCGATGCGAACAAGTACGTTGATCAGGTTCGTCAAGAACTCGATGCACGTATCTCTAGCAAAGAACGTGAACTGTCAGACTTGAAAGAGTCAATGGCGAAACACAATGTCGAAGAGAATGAGAAATCACGTACACTGATGGAGAAACAACTATCCTTCCTAGAAGAGATGGCAATGTCACTACGTCAGTTGAATGAGAAAGTTGGTTTCAATGGTTCGAGCAGAGAGGCGGAGCAAAAGGCTCGTGCACATCAGCAAGAACGTCAACGTATGGCGCAAACCATCACACATGACCGTGGTCCAATTAGCATGGCCCGTCAACGTACATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5c758e1683c6defcfbedb3e43d4297b6fdec2d400fc0b8bb74fa2e091a9de8e8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Vibrio bacteriophage with anti-biofilm activity Kim,S.G. and Park,S.C. 2019-04-18 — GenBank