Protein

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Genbank accession
ACV41145.1 [GenBank]
Protein name
gp45
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MTTIPHNKEPFLDASGLVARSWRTYLSSLTQSDAATQLQRQIDQLRAAPHTESLNGSNSALNAQLLATGSVDVTGTLSSGFVTLSLEGDTRIPEATSYYGTDAVGVKGWHPVPVVSVNGNTGSVLLKVSTLADVDASGIADKKALVWDASSNKHVYADIPSGGGGGSTGAMRIENITSAAATLTQSQAGSYLRFTYSGAKTVTVPPGLPVSSGVITVLSNQSSGPLTLSAGAGMALNGSAGAFVLQQGEAATLVFLSSSEADVITTSITGQASYTTAICVAFNGKNQWGDIASLPSSVIGNVPRTILALYNPFGGFGSSGARQAVFSGGALGTPQLRIGASSDETAFTYYESHADGSEPYGGVKGAGSATAGRWAAHAGKYDAGRCYAATHTTPWTDSDPTFTPSTSLTPVPPFTIARRYNAGSPDRYFNGYLHSLGVFNRALSSVEITDFFAHKDLTSINGLVSGWRFGTDGQTTVPNLVDGEAPCVLSGSPDYVRARI
Physico‐chemical
properties
protein length:500 AA
molecular weight: 51606,58560 Da
isoelectric point:5,84114
aromaticity:0,08200
hydropathy:-0,05580

Domains

Domains [InterPro]
DC_0914
STR
1–488
DC_0914
G3DSA:2.60.120.200
STR
265–485
G3DSA:2.60.120.200
IPR013320
STR
281–477
IPR013320
PF13385
LEC
319–448
PF13385
ACV41145.1
1 500
Architecture
STR
STR 1-488 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACV41145.1
1 500
Domain Start End Length (AA) Confidence
N-terminal 1 267 267 0,5609
Central domain 268 471 205 0,5087
C-terminal 472 500 28 0,9428
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-267
Central
268-471
C-terminal
472-500

Taxonomy

  Name Taxonomy ID Lineage
Phage Xylella phage Xfas53
[NCBI] 		670252 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xylella fastidiosa subsp. multiplex
[NCBI] 		644357 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xylella > Xylella fastidiosa

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACV41145.1 [NCBI]
Genbank nucleotide accession
GQ421471 [NCBI]
CDS location
range 35068 -> 36570
strand +
CDS
ATGACCACCATCCCCCACAATAAAGAACCGTTTCTTGACGCCTCCGGGCTGGTGGCGAGAAGCTGGCGCACCTATTTATCCTCGTTAACGCAAAGCGATGCCGCAACGCAGTTACAGCGGCAGATAGATCAGTTGCGGGCCGCTCCCCATACCGAATCCCTCAACGGCAGTAACAGTGCGCTCAATGCGCAACTGCTCGCAACAGGTTCAGTCGATGTAACAGGCACGCTTTCTAGCGGCTTCGTCACTTTGAGCCTTGAGGGAGATACTCGCATCCCAGAGGCTACTTCTTATTACGGCACCGATGCCGTAGGAGTGAAAGGCTGGCACCCCGTTCCGGTGGTTTCAGTGAATGGAAACACAGGGAGCGTCTTGCTGAAGGTGAGCACGCTTGCCGATGTGGATGCCTCCGGGATAGCAGACAAAAAAGCATTGGTGTGGGACGCCTCCTCTAACAAACATGTGTACGCCGATATCCCCTCCGGTGGTGGGGGCGGCAGCACAGGCGCTATGCGCATTGAGAACATCACATCAGCCGCAGCCACCCTGACGCAATCCCAAGCAGGGAGCTATTTAAGGTTTACATATAGCGGAGCCAAGACGGTGACTGTCCCCCCTGGGTTGCCGGTATCGTCTGGGGTGATCACCGTGCTTTCCAATCAATCCAGCGGCCCCCTCACTCTCTCAGCGGGGGCGGGCATGGCTCTTAACGGGTCGGCAGGCGCGTTTGTGCTGCAACAGGGCGAAGCCGCCACCCTTGTGTTCCTGAGCAGCAGTGAAGCGGACGTCATCACAACAAGCATCACCGGACAAGCCAGCTACACGACCGCTATTTGCGTTGCGTTCAACGGTAAAAACCAATGGGGTGATATCGCATCGCTCCCCTCGTCGGTCATCGGAAATGTGCCGCGTACTATTCTGGCGCTTTACAACCCATTTGGGGGCTTTGGCTCTAGCGGCGCACGTCAAGCGGTATTTAGCGGCGGCGCATTAGGAACACCGCAACTACGTATTGGCGCTTCTTCCGACGAAACCGCATTCACCTATTACGAGTCACATGCGGATGGCTCCGAGCCATACGGCGGGGTCAAGGGCGCGGGTTCTGCCACAGCGGGGCGTTGGGCTGCTCACGCAGGCAAATACGATGCGGGGCGTTGTTATGCCGCTACACACACCACACCGTGGACGGACTCCGACCCAACCTTCACGCCATCAACCTCATTAACTCCTGTGCCCCCGTTCACTATCGCGCGTCGATATAACGCAGGGTCACCCGATCGTTATTTCAATGGTTATCTGCATAGCCTTGGCGTATTTAACAGGGCGCTTTCCAGTGTCGAGATCACTGATTTCTTCGCGCACAAGGATTTAACGTCTATCAATGGTTTGGTGTCGGGATGGCGGTTCGGAACCGACGGGCAAACCACCGTGCCTAACTTAGTGGACGGCGAAGCGCCCTGTGTGCTTTCTGGGTCCCCGGATTACGTCCGTGCGCGCATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8d0a4ed331cdc13e55021c5ef518d10e0151003747e39c48710c09bdc69e164
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7744
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50