Protein

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Genbank accession
AVO23168.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSQLPDHSSRIICSELGFPYPFQVSVAPAKMVFGNVILTRSSVPRTIVVTNVGTNPVRIGEIVASGSFTATSDAPAYLNPGQHFLIDLVFRPRNEGISVGGLYVNTNGAQGTEYTSLMGYGYVEGTDPGGGEGGNPGGGSVLPRYWAFLGDGETTGFPIDGADAYDKLLYDTYIENTPGQKDYVGVNPVDFTIDPPIDGASPMIRFLVPVEDNAAGYTILRGYAKVYETPKPIETVAPGIDTTVTENNTIIDRTKQNTILVINSFGPITVRIRNKTGDDTKDWKNGEFFSVLQRGPGAVTLAMENPGQGQLYPAEGFIATTRGQDCVMSATCFNADGNQWVISGDMYREVASADVMQIELIDRSVASTAGITVGTKKDSYTLPYSMKLDAVVNAGLTGSLSDPQTDGTILTMDILRNGVSILTNKLTIDNNETTSTTATTPVSYAAGGDVLNKGDVISLSVTQVGNGTGRALRAYLLGQRLVE
Physico‐chemical
properties
protein length:483 AA
molecular weight: 51371,04300 Da
isoelectric point:4,61734
aromaticity:0,07867
hydropathy:-0,12505

Domains

Domains [InterPro]
IPR013783
STR
23–117
IPR013783 DC_0220 DC_2071
IPR013783
STR
25–105
IPR013783
AVO23168.1
1 483
Architecture
STR
STR
RBD
STR 23-117 | STR 175-349 | RBD 352-481 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVO23168.1
1 483
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,9174
Central domain 231 429 200 0,1014
C-terminal 430 483 53 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-429
C-terminal
430-483

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage RiverRider
[NCBI] 		2108116 Uroviricota > Caudoviricetes > Schitoviridae > Riverridervirus riverrider >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
fe8e5a31581bf51448df2e0cb19f82f528d416a3677e2ac445ac9ef187c78a89
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7432
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50