Protein

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Genbank accession
BDD79738.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSALSDALAAASTAIGQVATKIKSFQTATDSDESALQNQITTLSNTVSNIALVRGLFNALTVNTTGKDQSVSVQALEMVLKDGSGHVVVLSNVNVVAACSNQGIVGSGLNSLDTGTFQPNTWYSVWVVYNPSVGAGAILSASATAPTLPSGYTFYTRVGWIRTDSTTNCRPLAMQQKGAEVRYKVTASSNVTALPILASGAAGDTTIPTWVAIPWTAFAPPTTVDLKLLTGSNGGSCTVMVAPNNNFGAWNSIANLPPIMHSNVGSYLFTDDDIAVESNNIYWASNAGAQPPTPGTSGNSGILCVMGWTDNI
Physico‐chemical
properties
protein length:312 AA
molecular weight: 32301,87300 Da
isoelectric point:4,81969
aromaticity:0,07051
hydropathy:0,13718

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC9
[NCBI] 		2906467 No lineage information
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79738.1 [NCBI]
Genbank nucleotide accession
LC667451.1 [NCBI]
CDS location
range 180862 -> 181800
strand -
CDS
ATGTCAGCACTATCTGACGCGCTGGCTGCCGCCTCGACTGCGATTGGTCAGGTAGCCACGAAGATCAAGAGTTTTCAAACTGCAACTGATTCCGATGAGTCAGCGTTGCAGAACCAGATCACGACGCTCAGTAACACGGTGAGTAACATCGCCTTGGTGCGGGGTTTGTTCAATGCGCTGACAGTCAATACCACGGGTAAGGATCAAAGTGTTTCGGTCCAGGCTTTGGAGATGGTGCTTAAAGACGGCAGTGGTCATGTCGTCGTGCTCTCCAACGTCAACGTGGTGGCTGCTTGTAGTAATCAGGGCATTGTGGGCAGTGGGCTGAACAGTCTGGACACCGGTACGTTCCAACCGAACACCTGGTATTCTGTCTGGGTCGTCTACAATCCCTCTGTGGGTGCAGGGGCAATCCTTTCAGCCAGTGCTACAGCGCCGACGTTGCCTTCGGGCTATACGTTCTACACGCGCGTGGGTTGGATTCGTACGGATTCGACCACCAACTGTCGTCCGTTGGCCATGCAGCAAAAGGGCGCAGAAGTTCGCTACAAGGTGACTGCAAGCTCGAACGTTACGGCCTTGCCGATTCTGGCAAGCGGCGCGGCGGGCGACACCACCATTCCGACCTGGGTGGCGATTCCCTGGACTGCATTTGCACCGCCGACCACGGTGGATCTGAAGCTGCTCACGGGTTCGAACGGTGGTTCCTGTACTGTGATGGTGGCGCCGAACAATAACTTCGGTGCCTGGAACTCGATCGCTAACCTGCCCCCGATTATGCATTCGAACGTGGGTTCGTACCTCTTCACGGATGATGACATTGCCGTGGAGTCCAACAACATCTACTGGGCCTCCAACGCGGGCGCTCAGCCGCCGACACCAGGCACGTCAGGGAACTCGGGTATCCTGTGCGTGATGGGTTGGACTGACAACATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff5bde0f3010eab2f8f88b613e66f1e1225c2f719604fc0df843797846b77924
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8448
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank