Protein

View in Explore
Genbank accession
YP_010659106.1 [GenBank]
Protein name
lytic tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGVVDQLRTLAAEGRTGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAALKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNASDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR
Physico‐chemical
properties
protein length:521 AA
molecular weight: 57118,73670 Da
isoelectric point:4,99094
aromaticity:0,03647
hydropathy:-0,68580

Domains

Domains [InterPro]
DC_0193
STR
1–521
DC_0193
Coil
Unmapped
202–229
Coil
YP_010659106.1
1 521
Architecture
STR
STR 1-521
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PAP02
[NCBI] 		2713224 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010659106.1 [NCBI]
Genbank nucleotide accession
NC_070864.1 [NCBI]
CDS location
range 46292 -> 47857
strand -
CDS
ATGGCCCAAGAGATCACTTGGCGTAACATTGGTGCAACGGTAAGTCCTGGCAGTGCATCTTCGATGTCTGCTGGGACTACCGGTGTCCAACAAGCACTTGGTGCACTGGGTGACATCATCTCCCGTCAACAGGAGATGAACGTCAACAATGCCAAGTTGCAGCGTGAAGCCAACACGCAAAGCTATCTGGACCAGGTGGCAGCATCCACCCTGGAACAACTCAGCAACGCAGACTATCGCAGTGGCCTGGAGGCCCAACGTGATGCGATGGGGATGAACCTGGATCGTGCTGCTACTCGTGATGCGATCACCAAGCAGATCAGTGCTCAACAGAACCAAGCGGCTGCTACTCAGAAGTTCGACGACATGCAGGCTGAGGTAGGTCAACGAGGTGTCGTAGACCAGCTTCGTACTCTGGCAGCTGAAGGTCGTACTGGTGAAGTCAACCAGATCTTGGCTGAGCAACAGCTGATCAACGAGGGTGAGATCCGCAAGGAACTCACCGGTGTGCAGGATGCTATCCAGAATCGGCAGTACCGTGCAGCTGGTGAACAGCGTGCACAGGCAGCGGCCAACCGGGCAGCTGAAGCACACTCCCTCTCCATGGCTGCTGGTCGGGAGAATCTGGCTTTCACTCGTGAGCAGCGTGACGAACTACGCCGTGATCGTGATGAAGCGAAGCTGGTTTCGGGAACCATTGCAACCACCTTCCAGGACTACGACGAATCGCGTCAAGCACAGAGCGAGATCATGCGAATCGTCGGCAAGGAAGTTGGTATGCCTACCGATGACCAGGGCATGCCTGACATGAGCAGGGCTTCGCAAGACCAGTTGGATGCCTTCAGCAATGCGCTGAACGAAGCTGGTGTGCAAGCCAATACCTCTCCTACCGAGCGGCGGAATGCTGCACTCAAGTCTCTCGTGGATGCCGGGGTAAGTTCGAAGGGTATCGCTCAGGCCAAGCAAGAGATGGAACTCCGAGAATCCCTGGAGGGTCTGGCTCCGCAAGATCGCACGAAGGTTGAAGCAACCATAGGTGCGGTTAACGCAGAACTGGATACCCTGCAACGGACGGCTACCGAGGACTACGAACGGGAAGTTGCACGCAACCCGTTTGTCGAGCCTGACAAGGATCCGCTGGGTTCGGTCAACAAGATCGTAGACAAGGCTGTGAAGTCTGGTTTCGGCTGGGAAGGTGACCGCCAGGATCTGAACAACATGCTCGTGGACTTCGCCACCAACGGCATCAAGCTACCGGACGGACGTACTGCTGTGGTTCCGTCGAAGCTGTTGGAACAGGCGTTCAATACCACGAACACTTGGCTGTTCAAGAATGCCAGTGACGTGGAGAAACGGATCATCGAACTCATGACCACTGATGGCATGACCCAGATGCGAGAAGACGCTCCGACCATCCGGGAAAACTTCCTGAAAACTGTGTCGGACATCGCCAACCAAAAACGGTCGAATGCCGTTAAGGTAACTCGCTCGGCAGAACGGGAAAAGGGTGTTACCATGGACCCAACCGATGATCTAACTTTTGCACTACGAGGGAGGAAACGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b2fcee349ed87a8884f9cc97f158e97fd29dd8b52fce1becf50f69eb10e8c45d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7239
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genomic study of Pseudomonas aeruginosa phage PAP02 Lee,J.-H. and Jeong,H.-J. 2021-09-27 — GenBank