Protein

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Genbank accession
YP_009949054.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MILEGVYPSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQTKLAGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFEGSLLKAHQTDYLKASNGKASIRSTVSRNNCFVLNTEQVITKTPTGGTNPIPNPSTMGYISIRSGQFSKMYSVDIKSGSYTLSFGVGTSGSEAWQATPEWVATEMESRIKADATLNARYDVVREGSTVALKAKSDTDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNATTSTWKECGVYEEPYKFTNEPIYWYFDDTDTIQVKSLDIQPRTAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDRKELLVHQYLWAGEDRPLMSFHKWALPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGTLPEFLPEGELVAAVYSSETMRHAMVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSNSTVVDLTMTFKSTGEFEYHVSDTYGDVFDGETSAQAWSEAQLGYTRVNTVSDVKFPCGTLLSSTEFSIRTKSTTELNIISASYNIRIPNRGRRRL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 84436,75380 Da
isoelectric point:4,89591
aromaticity:0,10223
hydropathy:-0,24115

Domains

Domains [InterPro]
DC_0058
STR
1–763
DC_0058
IPR058003
TTP
7–761
IPR058003
YP_009949054.1
1 763
Architecture
STR
STR 1-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009949054.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,9768
Central domain 137 339 204 0,1429
C-terminal 340 763 423 0,2086
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-339
C-terminal
340-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SWH-Ab-1
[NCBI] 		2053604 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009949054.1 [NCBI]
Genbank nucleotide accession
NC_047896 [NCBI]
CDS location
range 29708 -> 31999
strand +
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAACCAAGTTAGCAGGTATTCCTAATAGTAGTTATATACGTTTAATTGACATCAATGGTGTTAATTACATTATGATCGTAGATACGGTTACAGGTACTTTAAAGATTTATAATTTTGAGGGTTCCTTACTTAAAGCACATCAAACAGATTATCTTAAAGCCTCCAATGGTAAGGCTAGTATCCGTAGTACAGTCTCACGTAATAATTGCTTTGTATTAAATACCGAGCAAGTTATTACTAAGACACCTACAGGTGGTACTAACCCAATACCTAATCCAAGTACTATGGGTTATATTAGTATTCGTTCTGGTCAGTTCTCTAAGATGTATTCGGTAGACATCAAGTCAGGTTCTTATACCTTGAGCTTTGGTGTAGGTACGTCTGGTAGTGAGGCATGGCAGGCTACTCCTGAATGGGTAGCTACTGAGATGGAGAGTAGGATTAAAGCAGACGCTACTCTTAACGCACGTTATGATGTTGTACGAGAAGGTAGCACAGTTGCACTTAAAGCTAAATCTGATACAGATACAAACTTACTAGTGATTGAGTCTGGTACAGGTAGTACTTATATTCAGACGAGTAATTCTAGTCGTGTACAAGGTAAACAGGACATCATTGCTAACCTACCTAATATCTTAGATAAGTATATTATTGCGGTAGGTACAGTAGGTAACTCCGCTTATTACCAATACAACGCTACTACAAGTACTTGGAAAGAATGTGGTGTATATGAAGAACCCTATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACTGATACTATCCAAGTTAAAAGCCTAGATATTCAACCGCGTACAGCAGGTGATGACGATAATAACCCATTACCTAAGTTTGTGGATTTTGGTATTACAGGTATTAGTGCATACCAATCACGTTTAGTACTACTTAGTGGTTCGTATGTTAATATGAGTGCTACAGCAGACTTTAATGTCTATATGCGTACTACTGTAGAGGAATTACAGGATGATGACCCCATTGAAGTGTCCAGTACTGCTTTGAGCGCTGCACAGTTTGAGTATGCTGTTCCGTATAATAAAGATTTAGTCTTATTAGCTCAGAACCAACAAGCTGTTATCCCAGCCAATAGTACTGTACTTACACCTAAGACGGCTGTTATCTACCCAAGTTCAAAAGCTAACATTAGTATGGCTAGTGAGCCACAGGTTGTATCCCGTAGTCTGTATTACACATATCAACGTGGGACCGATTACTATCAAGTTGGTGAGATGATCCCTAATGCTTATTCGGATGCCCAATACTATGCTCAGAACTTAGCAGACCATATTCCGTTATATGCTACGGGTGTTTGTACTTCGATCACAGGCAGTACTACAGATAATATGGCAGTGTTCAGTTCAGATCGGAAAGAGTTACTTGTACATCAATATTTATGGGCAGGTGAAGACCGTCCGTTAATGAGCTTCCATAAATGGGCATTACCTTACGATGTGCTTCACGTACAATTTCTACAAGAGTATTTAGTATTGTTTATGGATGTGGGTGATGATTTAGTGGTTGGCACTATTAACGTACAGTTAAACCAACTAGACAATAAACCTATCCCATTCTTAGACATTTACCAATACGTAGATATTGTGGATGGTGAAGGTACGTTACCTGAGTTCTTACCAGAAGGTGAGTTAGTAGCTGCGGTATATAGTTCTGAGACTATGCGTCATGCTATGGTTCAATACGAAATAGAAGGTACTAAGATTAAATGTCAATTTAACGGGCGTATTTATCTAGGTGTGCCTTATGAAAGTTCACTCACACTAACACCTCCCTTTGTTAAAGATGATAAAGGTCGAGTAGTTGCTGGAAGTAATAGTACAGTAGTTGATCTTACAATGACATTCAAAAGTACAGGTGAGTTTGAGTACCATGTTTCTGATACTTATGGTGATGTGTTTGATGGTGAAACATCCGCGCAAGCTTGGTCAGAAGCACAACTAGGGTATACGAGAGTAAATACAGTTAGTGATGTTAAGTTCCCTTGTGGTACGTTATTAAGTTCAACAGAGTTTAGTATACGTACTAAAAGTACAACTGAATTAAACATCATTAGTGCTAGTTATAATATCCGTATACCAAACAGAGGACGGAGACGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e176d9f62ca335667610db612e0536b1d2db944d3dc39b5c55f31c94fb8c6f8a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8645
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a novel lytic phage and its application as a potential bio-disinfectant Mei,H., Juan,L. and Bo,Z. 2012-07-28 — GenBank