Protein

View in Explore
Genbank accession
AGK88193.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MALKDDWGNGDQYSAEDQNDVADAVNALEIEVAGKADSAHNHSAGDITSGTLSIDRIPTGSSGSTVCIGNDSRLSNTRTPTDNTVSTAKIQDGAVTTAKIGDGQVTSAKIADGTIVNADISASAAIAKTKLDSGTQTSLGLADNSVQKSGSATGLWMGSTLPGSGTAGVLYVVTP
Physico‐chemical
properties
protein length:175 AA
molecular weight: 17499,84040 Da
isoelectric point:4,39095
aromaticity:0,02286
hydropathy:-0,22514

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGK88193.1
1 175
Domain Start End Length (AA) Confidence
N-terminal 1 77 77 0,9190
Central domain 78 164 88 0,1566
C-terminal 165 175 10 0,9926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-77
Central
78-164
C-terminal
165-175

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage WIVsmall
[NCBI] 		1327036 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mycobacterium smegmatis str. MC2 155
[NCBI] 		246196 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae > Mycobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGK88193.1 [NCBI]
Genbank nucleotide accession
KC736071 [NCBI]
CDS location
range 30288 -> 30815
strand -
CDS
ATGGCTTTGAAGGATGATTGGGGCAACGGTGATCAGTATTCGGCTGAAGATCAGAACGATGTCGCCGACGCCGTTAACGCCCTAGAGATTGAGGTCGCCGGCAAGGCTGATTCAGCCCACAACCATTCGGCCGGCGACATCACTTCTGGAACCCTCAGTATCGACCGTATCCCCACGGGCTCATCGGGGTCCACGGTGTGCATCGGCAACGACTCGCGGCTGTCGAACACCCGCACCCCGACTGACAACACTGTGTCGACGGCGAAGATCCAGGATGGCGCGGTGACTACCGCCAAGATCGGCGATGGCCAGGTGACCTCGGCGAAGATCGCCGACGGCACCATCGTCAACGCCGATATCAGCGCGTCGGCGGCGATTGCGAAAACGAAGCTCGATTCGGGCACGCAGACGTCGCTAGGTCTCGCTGACAACTCGGTTCAAAAGTCCGGTAGCGCAACCGGTTTATGGATGGGTAGCACACTGCCCGGTAGCGGTACTGCTGGTGTGCTGTACGTGGTGACGCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f0cc78cdd3c99d652d1339aec95aaf6245038ca7fec7584b8187366d601fed2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8179
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50