Protein

View in Explore
Genbank accession
WRQ13159.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSGTLITITXAGRXAMVAPGNTGTNAHQVVXXXLAPLLSSKIGLASAPFVADKGMLAMPNERXRITTFGGSNIAPDTVHVTLKDDTDDQYTLYGFGLYLENDVLLGVYSQATPIMEKSPAAMLLLSADLLLTSIDAAALTFGDALFLNPPATETVQGVIELATQAEVDAGLDASRAVTPARLKPRLDAKANLSGADFTGPVKTSDAFTVSGALGSGGIFGPGNGDAASRTTNNVALRSWFGIGFAPTFDGGPVPKTEFSHWFDTRTGNTGMRGALDVGGLITALTPPTGDVSKKVPTTEWVIAAIASAAVGTIVFEPRTSVRAGFLKLNGAVLNRADYPALWAYAQASGAIVAESAWASNNWGCFSTGDGATTFRIPELRGEYMRFWDDGRGVDAGRGIGSWQDSQNRSHAHGASAGAVGDHAHSAWTDVQGWHDHGDPWKHALNSGTANGSDGAEASDAGGGWRPRTDANGNHVHNVGIGAAGAHSHGITINADGGAEVRVRSLAMLAMIRAY
Physico‐chemical
properties
protein length:514 AA
molecular weight: 52623,06580 Da
isoelectric point:5,57320
aromaticity:0,07480
hydropathy:-0,07028

Domains

Domains [InterPro]
DC_0350
STR
81–514
DC_0350
IPR005601
STR
200–316
IPR005601
SSF88874
STR
301–513
SSF88874
IPR037053
ATT
307–386
IPR037053
WRQ13159.1
1 514
Architecture
STR
ATT
STR
STR 81-306 | ATT 307-386 | STR 387-514
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_BceM_CEP1
[NCBI] 		3113641 Uroviricota > Caudoviricetes > Peduoviridae >
Host Burkholderia sp.
[NCBI] 		36773 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WRQ13159.1 [NCBI]
Genbank nucleotide accession
PP058116 [NCBI]
CDS location
range 14026 -> 15570
strand -
CDS
ATGAGCGGAACACTCATCACCATCACCGNCGCCGGCCGNGNTGCGATGGTCGCNCCCGGCAACACGGGCACGAACGCGCATCAAGTCGTANANNNNNGCCTCGCNCCGCTGCTTTCGTCGAAGATCGGCCTTGCCTCGGCCCCTTTCGTCGCCGACAAGGGCATGCTCGCCATGCCGAACGAGCGCNAGCGCATCACGACATTCGGCGGCTCGAACATCGCCCCCGATACCGTGCATGTCACGTTGAAAGACGATACCGACGATCAATACACGCTTTATGGTTTCGGTCTGTATCTCGAAAACGATGTGCTGCTCGGCGTATATAGCCAAGCGACGCCGATCATGGAAAAGTCGCCGGCCGCAATGCTGCTGCTGTCGGCCGACCTGCTGCTCACATCGATCGACGCGGCGGCACTCACGTTTGGCGATGCGCTGTTCCTGAATCCGCCGGCGACTGAGACCGTGCAAGGCGTTATCGAGCTGGCGACGCAAGCCGAAGTCGACGCCGGCCTCGATGCGTCGCGAGCTGTGACGCCGGCGAGGCTTAAGCCGCGCCTCGATGCAAAGGCGAATCTATCCGGCGCGGACTTCACCGGCCCCGTGAAAACGTCTGATGCCTTCACGGTTTCGGGCGCGCTAGGTAGCGGCGGCATATTCGGCCCCGGCAACGGCGACGCGGCAAGCCGCACGACGAATAACGTCGCGCTGCGCTCATGGTTCGGCATTGGCTTTGCCCCGACTTTCGACGGCGGCCCCGTGCCGAAAACCGAGTTTTCGCATTGGTTCGATACGCGCACGGGTAACACCGGCATGCGTGGCGCGCTCGATGTGGGCGGCCTTATCACCGCACTCACGCCCCCGACAGGCGATGTGTCGAAGAAAGTGCCGACGACTGAATGGGTTATTGCGGCGATCGCGTCGGCCGCTGTTGGCACGATCGTTTTCGAGCCGCGCACGAGTGTCCGCGCTGGCTTTCTCAAGCTCAATGGCGCTGTGCTCAATCGCGCGGACTATCCCGCGCTGTGGGCCTATGCACAAGCAAGCGGCGCAATCGTCGCTGAATCGGCTTGGGCCTCGAACAATTGGGGCTGTTTCTCGACTGGCGACGGCGCGACGACTTTTCGCATACCCGAGCTGCGCGGCGAATACATGCGTTTTTGGGATGACGGCCGAGGCGTCGACGCGGGGCGCGGTATCGGCTCATGGCAAGACAGCCAGAACCGCTCACACGCTCACGGCGCGAGTGCGGGGGCTGTTGGCGATCACGCACACAGCGCATGGACCGATGTGCAGGGCTGGCACGACCACGGCGACCCCTGGAAACACGCGCTCAACTCAGGCACGGCGAACGGCTCGGACGGCGCGGAAGCATCGGACGCCGGCGGCGGCTGGCGCCCGCGCACCGATGCGAACGGCAATCACGTCCATAACGTCGGCATCGGCGCGGCCGGCGCGCACTCGCACGGCATCACCATCAACGCGGACGGCGGCGCAGAAGTGCGCGTTAGAAGCCTCGCAATGCTCGCGATGATCCGGGCTTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
288dffc356527415780ca60b3335ea68776c535eccf042dbc10316b311efa7ce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7280
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Burkholderia phage Askoura,M. 2024-11 — GenBank