Protein

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Genbank accession
QGZ17701.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MPLTNVQIRPGLNKSDTPSGAEGQWIDGDFVRFRYGQPEKIGGFQAIGQHTISGPARAQHCWNDLEGRKYAALGTSKALYIYYEDAFYDITPLATAITGATFTSTNGSSTVTVNKASHNLTAGEYVTFTSVTVPGATTTLNGDITDSATTITLTDASSFSSSGSVRIEDEIITYSGKSSNDLTGCTRGTNGTTAVAHANTTEVRESTVTRYNTTDFTVLTFEVLTVATNSFTITMAISETGTGMSSAGGASINPYEEIGPTIQTYGYGWGTDTWGSDEWGEGSTSTQVVLDPGSWSLDNFGQQLIATIKDGKTFTWDAGAANPLENRATIMTGAPTASRLTIVSDRDRHVVHFGTETTIGDSTTQDPMFIRFSDQEDYNVYAPTSVNTAGTFRLDTGNKIVAAVSGKDYNLILTDTAAYVMQFVGPPFTFSIRQVGSNCGCIGQHAVVYADGQVFWMGTGGGFFRYDGTVKLLPSLVEDFVFTTNGDNIGVNYSSNEIIYASHNSLFNEIVWFYPSGKPLNDPATQNNRSVVYNYVENTWSVMTLARSTYHDASTYDLPYATEYTTTGTPTFTNLSGATNTFGATKYFAQETGTNIIDLDGTETPIAAFIQSGDFDLPTDGDGQFLLRISRFLPDFKNLQGNAVITIGLKDFPIDTNASSQLGPFTINSSTQKIDTRARGRLANLKVENTANDETWRFGTFRADVNPDGRR
Physico‐chemical
properties
protein length:711 AA
molecular weight: 76836,56570 Da
isoelectric point:4,63644
aromaticity:0,10830
hydropathy:-0,29550

Domains

Domains [InterPro]
DC_0201
ATT
1–181
DC_0201
IPR023366
STR
98–166
IPR023366
DC_0191
STR
158–711
DC_0191
QGZ17701.1
1 711
Architecture
ATT
STR
ATT 1-181 | STR 182-711
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ17701.1
1 711
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,8727
Central domain 93 291 200 0,5065
C-terminal 292 711 419 0,4065
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-291
C-terminal
292-711

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC023P
[NCBI] 		2686455 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17701.1 [NCBI]
Genbank nucleotide accession
MN698239 [NCBI]
CDS location
range 48007 -> 50142
strand +
CDS
ATGCCTTTAACAAATGTTCAAATAAGACCAGGACTTAATAAATCAGATACGCCTTCAGGTGCAGAAGGACAATGGATTGATGGTGACTTTGTAAGATTTAGATATGGTCAACCAGAAAAAATTGGTGGTTTTCAAGCTATAGGTCAACATACAATTTCTGGTCCTGCAAGAGCGCAACACTGTTGGAATGATTTAGAAGGGAGAAAGTACGCAGCACTAGGTACATCAAAAGCTTTATATATTTATTATGAAGATGCATTTTATGACATTACACCTTTAGCAACTGCAATTACAGGAGCAACATTTACATCAACAAATGGTTCATCAACTGTAACTGTTAATAAAGCATCACACAATCTTACTGCTGGAGAATATGTTACATTTACTTCAGTAACAGTCCCTGGAGCAACTACAACTCTTAACGGTGATATAACTGATAGTGCAACAACAATTACATTAACAGACGCTTCATCTTTTTCATCCTCTGGTTCTGTAAGAATTGAAGACGAAATAATTACATACTCAGGTAAATCATCTAATGATTTAACAGGATGCACAAGAGGAACTAACGGTACGACTGCAGTCGCTCATGCCAACACAACTGAAGTAAGAGAGTCTACTGTTACAAGATATAATACAACAGATTTTACAGTTTTAACTTTTGAAGTTTTAACAGTCGCAACCAATTCATTTACAATTACTATGGCAATATCAGAAACAGGAACTGGTATGTCCAGTGCAGGAGGCGCATCTATAAATCCTTATGAAGAAATAGGGCCAACAATTCAAACATATGGTTATGGTTGGGGTACAGATACATGGGGATCTGATGAATGGGGAGAAGGTAGTACCTCTACACAAGTTGTTCTAGATCCTGGTTCTTGGTCGTTAGATAATTTTGGACAACAACTTATTGCAACAATTAAAGATGGTAAAACATTTACTTGGGATGCTGGAGCTGCAAACCCATTAGAAAATAGAGCAACAATAATGACAGGTGCACCAACTGCTTCAAGACTTACGATTGTGTCTGATAGAGATAGACACGTTGTTCATTTTGGAACTGAAACAACTATAGGTGATTCAACTACACAAGATCCGATGTTTATAAGATTTAGTGATCAAGAAGATTACAATGTTTACGCACCTACGTCAGTTAACACTGCGGGAACTTTTAGATTGGACACCGGGAACAAGATTGTAGCTGCTGTTTCTGGTAAAGACTATAATTTAATTTTAACTGATACTGCTGCATATGTGATGCAGTTTGTAGGTCCACCGTTTACTTTTTCTATAAGACAAGTTGGATCTAACTGTGGATGTATTGGTCAACATGCAGTTGTTTATGCAGATGGTCAAGTATTTTGGATGGGTACTGGTGGAGGGTTCTTTAGATACGATGGTACTGTAAAACTCTTACCATCATTAGTTGAGGACTTTGTGTTTACAACTAATGGAGACAATATTGGTGTTAATTATTCGTCTAATGAAATTATCTATGCATCACACAATTCATTATTTAATGAAATAGTTTGGTTTTATCCTTCTGGTAAACCACTTAATGATCCAGCTACACAAAACAATAGAAGTGTAGTTTATAACTATGTTGAGAATACTTGGTCGGTGATGACACTAGCACGAAGCACGTACCACGATGCCTCTACTTATGATCTTCCATATGCAACGGAATACACAACGACAGGCACTCCTACTTTTACTAATTTGAGTGGTGCAACAAACACATTTGGTGCAACTAAATATTTTGCACAAGAGACTGGAACAAACATTATAGATTTAGATGGTACCGAAACTCCTATTGCTGCATTTATACAATCTGGAGATTTTGATTTACCAACTGATGGAGATGGTCAGTTTTTACTTAGAATAAGTAGATTTCTTCCTGATTTTAAAAACTTACAAGGTAATGCAGTTATTACAATTGGTTTAAAAGATTTTCCAATTGACACAAATGCTTCATCTCAATTAGGTCCATTTACAATTAATTCATCAACACAAAAAATTGATACTAGAGCTAGAGGTCGTTTAGCAAATTTAAAAGTAGAAAATACAGCTAATGATGAGACTTGGAGATTTGGAACATTTAGAGCTGATGTAAACCCAGATGGGAGAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ee228c67e5b603cfb4464361bce8cab714bcec6f7a84a23b05d706ce4c4f81d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank